Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00361 ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAAAAGGCctggaggaagaagagaaaGTATGAGCTTGGTCGTCAGCCAGCCAACACTAAGCTATCAAGCAACAAGACAGTCAGGAGAGTTCGTGTTAGAGGTGGCAATGTCAAATGGAGGGCATTGAGATTGGATACCGGAAACTACTCATGGGGTAGTGAAGCTGTAACCCGCAAAACCCGTGTCCTAGATGTGGTTTATAATGCCTCAAACAATGAGCTTGTGCGAACTCAGACCCTAGTGAAGAGTGCTATTGTTCAGGTGGATGCTGCTCCATTTAAGCAGTGGTACCTTCAACATTATGGGGTTGATCTTGgtaggaagaagaaaacagctGCAAAGAAGGACTCTACAGAGGAGGGTGAAGCTCCTgcagaagaaacaaagaagagtAACCATGTGCAGAGAAAATTGGAGAAGCGCCAGAAAGACCGGAAACTTGACCCGCACATTGAAGAGCAGTTTGGTGGCGGCCGATTGTTGGCTTGCATTTCTTCTCGTCCTGGTCAATGTGGCAGAGCTGATGGGTACATATTGGAAGGTAAGGAACTTGAGTTTTACATGAAGAAAATCCAGAGGAAGAAGGGGAAAGGTGCTGGTGCTGCTTG 659 0.4401 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDLGRKKKTAAKKDSTEEGEAPAEETKKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00361 219 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
Bva01g00361 219 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Bva01g00361 219 Gene3D - 26 212 - -
Bva01g00361 219 MobiDBLite consensus disorder prediction 1 42 - -
Bva01g00361 219 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Bva01g00361 219 MobiDBLite consensus disorder prediction 11 26 - -
Bva01g00361 219 MobiDBLite consensus disorder prediction 129 167 - -
Bva01g00361 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 - -
Bva01g00361 219 CDD Ribosomal_S8e_like 5 196 - -
Bva01g00361 219 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Bva01g00361 219 PANTHER 40S RIBOSOMAL PROTEIN S8 1 216 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00361 Bva-Chr1 3105756 3107816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00361 1 219 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.091 7.06e-128 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00361 K02995 - tcc:18612677 409.068