Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00359 ATGGAAAACGAATTCTTTCTGAATGCAGGGATTTCTGCTCCCCTACAGTTTGagccttcatcttcttcttcaaggCCCACTTGGCAATCACTCTCCTCCGCCATGGTTATCAATGGTTCCGAGCAAACCCAGGATTGTTTCTACAACAACCCCACTTGGGAAAAGTCAACGGATCATGCTCTTCAGTTTGATTCTGCTCTGAGCTCGATCGTTTCTTCGCCGGCGGCATCCAATTCAAATGTGTCTAACGAGAATTTTGTCATCAGAGAATTGATTGGTAAGTTGGGAAACATTGGCAGCTCCTGCGAGATATCGCCGCATTCGCAGCCGTTCATCGGAGCTGCTTCTTACATGAACGGCAATAAGAGTGCCAATACTTCGTGTTATAGCACGCCTCTGAGTTCTCCTCCAAAAATGGGCATTCCCCAAGTGATGAATCAGAGCTTGCCCAGTTTGGGGAAATCAATGGCTTTGAATTCCACCGTAGCAGAATTCTCAGCTGATCCTGGATTTGCAGAGAGGGCTGCAAGGTTTTCTTCCTTTGGCAGCAGAAGCTTCAATGGCAGAACAAGCCAATTTGCGATGAACAAGAACAATGGTGAATTCAGTCAGAGTCAGAGATCTACGTCTACTCCATTGATGGAAAATGGCAAGCTTTCTCGGGTTTCGAGCAGTCCAGCGCTCAAGGCACTTGGATCTCAAATGGGTGCtcaagaaaacaagaattcTCCCATGGAATTGGCAAATTCTCAAGAGGAATCCACGCTCTCTGAGCAGACTCTAAATGGAGAAACAGGGGTGAAACCTTCCCCAGAAATGAACtccaggaaaagaaaagcaccCTCCAAAGGAAAAGTCAAGGAAACTTCAACCTCAAATAACCCTCCAAAGGCACTTGAAGCTAATGAGGACTCGAATTCGAAGAGAATCAAGCCAAACGAAGGCGAAGGCAATGAAAATGGCCCTTTGAAAGCAGAGGAAGAGTCAAAAGGAGGCAATAGCAATGcagaagagaaacaaacaaagagtAACTCAAAGCCTCCTGAGCCTCCAAAAGATTATATTCATGTCAGAGCAAGAAGGGGTCAAGCTACTGATAGCCATAGCCTTGCAGAAAGGttaaggagagagaaaatcagtgaaagaatgaaacttctccaagatCTTGTCCCAGGATGCAATAAGGTCACTGGAAAAGCACTTATGCTAGATGAGATTATAAACTATGTGCAGTCATTGCAGAGGCAAGTTGAGTTCCTGTCTATGAAACTAGCTTCTGTGAATACCAGGCTGGATTTTAGTGTTGAAAGTCTAATCTCAAAAGATATTTTTCAACCAAACAATTCTTTAGCACATCCAATATTCCCTCCCTTGGATTCCTCAGCACCACCCTTTTTTGGGCATCAGCTTCAGCAAAACCCAGCTCTCCACAACGCAGTGGACCCATTATCAGATGCTACTGCACTTTGCCAAAATCTGGGCATGCAGCTACCTCTGCTAAATGGGTTCAATGAAGCTGCTTCTCagtATCCAATACCATTTTCTGAAGATGATCTCAACACCATTGTTCAAATGGGGTTTGGCCAAACTGCAAATAGGAAATCACCAACACAACCTCAGAGCTTTAATGGAGGCTCAAATCACATGAAAGTTGAGCTCTA 1661 0.416 MENEFFLNAGISAPLQFEPSSSSSRPTWQSLSSAMVINGSEQTQDCFYNNPTWEKSTDHALQFDSALSSIVSSPAASNSNVSNENFVIRELIGKLGNIGSSCEISPHSQPFIGAASYMNGNKSANTSCYSTPLSSPPKMGIPQVMNQSLPSLGKSMALNSTVAEFSADPGFAERAARFSSFGSRSFNGRTSQFAMNKNNGEFSQSQRSTSTPLMENGKLSRVSSSPALKALGSQMGAQENKNSPMELANSQEESTLSEQTLNGETGVKPSPEMNSRKRKAPSKGKVKETSTSNNPPKALEANEDSNSKRIKPNEGEGNENGPLKAEEESKGGNSNAEEKQTKSNSKPPEPPKDYIHVRARRGQATDSHSLAERLRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSVESLISKDIFQPNNSLAHPIFPPLDSSAPPFFGHQLQQNPALHNAVDPLSDATALCQNLGMQLPLLNGFNEAASQYPIPFSEDDLNTIVQMGFGQTANRKSPTQPQSFNGGSNHMKVEL 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00359 553 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 363 413 IPR011598 GO:0046983
Bva01g00359 553 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 546 IPR024097 GO:0006355
Bva01g00359 553 MobiDBLite consensus disorder prediction 190 354 - -
Bva01g00359 553 CDD bHLH_AtBPE_like 353 438 - -
Bva01g00359 553 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 361 432 IPR036638 GO:0046983
Bva01g00359 553 Gene3D - 360 435 IPR036638 GO:0046983
Bva01g00359 553 Coils Coil 410 430 - -
Bva01g00359 553 MobiDBLite consensus disorder prediction 302 335 - -
Bva01g00359 553 SMART finulus 369 419 IPR011598 GO:0046983
Bva01g00359 553 MobiDBLite consensus disorder prediction 530 547 - -
Bva01g00359 553 Pfam Helix-loop-helix DNA-binding domain 367 414 IPR011598 GO:0046983
Bva01g00359 553 MobiDBLite consensus disorder prediction 190 269 - -
Bva01g00359 553 MobiDBLite consensus disorder prediction 286 301 - -
Bva01g00359 553 PANTHER BHLH TRANSCRIPTION FACTOR 2 546 - -
Bva01g00359 553 MobiDBLite consensus disorder prediction 530 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00359 Bva-Chr1 3088495 3091516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00359 1 509 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 45.905 4.79e-115 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva01g00359 HLH 2.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00359 - - gmx:100812081 724.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00359 01 3088495 3091516 Bva02g01123 02 15457327 15460324 BWGD