Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00353 ATGAATCTGTCAGCAAATAGCGAGATAAAAGATCAATACCAGTATCGTGAGAAGGAAAGGAGGAGTTTAGACCCTTCTTGCTTCTCGACCAAGGGGAGGGAAGTTATGCTTAGCTTATGctcaagagaagaaaagaaggaagtgAGAAAGAAAGCGGCTTTGGCTTTGAGATTAGGATTGGAAGGAAGAAGTCAGCTAGAAAGGATATTCCTGACTTACTGGTTAAATATAGCTTATAAAATCTATTCAACTACGTCGCGCAGCTTCAGATTTCCCGAGACAATCGGCAATCCCACGGTTTTCTCCAAGTTACCGGTCACCATAGCCACCATGAAGGACGAAGACGTAGTAGAAGAGTTCTTCCGCCGTGAACCACCAGCTGCCGCGACCTTGGATTTTCGAACCATCAGGGCAATCTCCGCCGTCGGCCGTGGTGCCAAGGGCGTGGTGTTCCTCGCCAGAGACGACGCCTGTGATGATGGGAATGAGATTTTCGCTCTCAAAGTGATTTCTAGAGCTCTGCTTCAGAAAAAGGCCAAGGCAGTTAACAATGGATTGGGACAGTGCAAGAGAGTTTCTTTCGAGCAACAAGTACTGCGGCAGTTTGATCACCCGCTCTTGCCCAGATTGCGAGGGGTTTTGGAAACCGAGAAAATCATCGCCCATGCCATTCCCTATTGCTCCGGTGGGAACCTCCATTCTCTCAGAAAAAGGCAATCCGAGAAAATGTTCTCTAACGACAGCATCAGGTTTTACGCCGTGGAATTGATCCTTGCATTGGAATATTTGCACGGTTTGGGAATAGTGTACCGAGATTTGAAGCCGGAAAACATAATGATCCAAGACAACGGTCACATAATGCTCGTTGATTTCGATCTTTCCAAAAAGCTGAACTCCAAGTCTCCACCGACGAGTTGCCACTCGTCCCCGAGTTCAGACTCTGTGAGAGCCAGGAGGAAGAGCTGCATATTACGGTTCTACAGTTTCTGCAGCTCGGGCATTACGCCGTACGACTCGGATTTCAACTGCGATAACTCGACTCCGACTGACTCGTGCTCGGTGGAGAAATCCAACTCGTTCGTCGGAACGGAGGAGTATGTTTCGCCGGACGTAATATCCGGAAAAGGCCACGATTTCGGCGTTGATTGGTGGTCACTCGGCGTCGTTTTGTACGAAATGCTATATGGAACGACGCCGTTTAAGGGGGCAAACAGGAAGGAAACGTTTTATCGGATTTTGACCAAGGATCCAGAACTTGCGGGAGAGAAGACGCCGTTAAGAGACTTGATTGGGAAACTATTGGAAAAAGATCCCAACCGTCGGATCGGACTGGATGAAATCAAGAGCCACGAGTTCTTCGAAGGGGTTAACTGGGACATGGTACTGGAAATCTCACGGCCGCCGTTTATTCCTGAAACGGAGGTTCGGGATAGGGATGGGATTTCCAAAATAGATGTGGAGTTATTTGTCCATGGaatattttttggaaaaagtGTGGaggatgagaaaaaaaataaagtgcaGGAGGGAAAGAAGGGCgaagaaaatttggaaaataacAAGGGAGTGTGGGTTGAAAAGCTGAGCCAGCAAGCTCAACACCCCACTGAggctgaaaattttttaattttttg 1634 0.4541 MNLSANSEIKDQYQYREKERRSLDPSCFSTKGREVMLSLCSREEKKEVRKKAALALRLGLEGRSQLERIFLTYWLNIAYKIYSTTSRSFRFPETIGNPTVFSKLPVTIATMKDEDVVEEFFRREPPAAATLDFRTIRAISAVGRGAKGVVFLARDDACDDGNEIFALKVISRALLQKKAKAVNNGLGQCKRVSFEQQVLRQFDHPLLPRLRGVLETEKIIAHAIPYCSGGNLHSLRKRQSEKMFSNDSIRFYAVELILALEYLHGLGIVYRDLKPENIMIQDNGHIMLVDFDLSKKLNSKSPPTSCHSSPSSDSVRARRKSCILRFYSFCSSGITPYDSDFNCDNSTPTDSCSVEKSNSFVGTEEYVSPDVISGKGHDFGVDWWSLGVVLYEMLYGTTPFKGANRKETFYRILTKDPELAGEKTPLRDLIGKLLEKDPNRRIGLDEIKSHEFFEGVNWDMVLEISRPPFIPETEVRDRDGISKIDVELFVHGIFFGKSVEDEKKNKVQEGKKGEENLENNKGVWVEKLSQQAQHPTEAENFLIF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00353 544 Pfam Protein kinase domain 139 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00353 544 Pfam Protein kinase domain 356 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00353 544 SMART serkin_6 136 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00353 544 Gene3D Transferase(Phosphotransferase) domain 1 231 302 - -
Bva01g00353 544 Gene3D Transferase(Phosphotransferase) domain 1 353 472 - -
Bva01g00353 544 SUPERFAMILY Protein kinase-like (PK-like) 139 479 IPR011009 -
Bva01g00353 544 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 128 514 - -
Bva01g00353 544 Gene3D Phosphorylase Kinase; domain 1 475 485 - -
Bva01g00353 544 PANTHER FLIPPASE KINASE 1-RELATED 128 514 - -
Bva01g00353 544 Gene3D Phosphorylase Kinase; domain 1 138 230 - -
Bva01g00353 544 ProSiteProfiles AGC-kinase C-terminal domain profile. 454 544 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva01g00353 544 ProSiteProfiles Protein kinase domain profile. 136 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00353 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00353 Bva-Chr1 3044679 3048041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00353 130 544 AGC Kinase Gene Family AT3G25250 54.286 2.73e-148 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva01g00353 Pkinase 4.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00353 K20714 - gmx:100813693 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00353 01 3044679 3048041 Bva02g01118 02 15399559 15401258 BWGD