Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00324 ATGGCTAGAAGAGATACTAGCGTGGTCTTATACATATTCTTACTTCACATTTTCTTGAGCTTTGTGATAAGCCTATCAGCCCCAGAGGGTGCTCTTATAACACAGCTTCCTGGTTTTAATGGCGCTTTTCCTTCCAAGCACTATGCTGGGTATGTGACAATTGATGAAAGTCATGGAAGGAATTTGTACTACTATTTTGTTGTATCAGAAAGCAAACCGTCTCAGGATCCAGTGGTTCTATGGCTCAATGGTGGACCCGGGTGCTCTAGTTTCGATGGCTTCGTATACGAGCATGGCCCATTTAATTTTGCAGCAGCAAAGACTAAGGGTGGCCTTCCCAAATTGCAACTCAATCCCTACAGCTGGTCGAAGGCTTCCAACATCATTTACTTGGATTCTCCTGCTGGTGTgggattttctttctcaaacaATCAATCTGATTACATAACTGGAGACTTAACGACGGCTGCTGATACACACGACTTTCTCCTCAAGTGGTTTGAACTATACCCGGAGTTCCTTTCCAACCCATTTTTCATTGCTGGAGAGTCATATGCTGGAGTTTATGTGCCTACTCTTGCTTATGAAGTGATGAAAGGAATTGATTCTGGTGTGAAACCCCATCTGAATTTCAAGGGTTACATGGTAGGAAATGGTGTTACAGATAACAAATTTGATGGCAATGCTCTTGTTCCGTTTGCACATGGAATGGGTCTTATCTCAGATGATCTGTATGAGGAGGTAGTAAAAGAGTGCAATGGGAATTTCTATGATCCTGACCCAACCAAAGACATTTGCAGGGAAAAGCTTGCAAAAGTTGATGAGGTCATAGGTGGGTTAAACATTTATGACATACTAGAACCGTGTTATTACGGCACAGTGACCAAGGATAATAAAACATCCAATCCTAGGTTGCCGGCTAGCTTCCGGATGCTAGGTGAGACCGAGAGACCTCTTCCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCTCTGAGGGCTCCAGTGAGAGATGGAATTGTACCTACTTGGCCACAACTTAGCAGCAGTGGCGACGTTCCTTGTACTGATGATGAGGTTGCTACCACATGGTTGAACAATGCAGAAGTGAGGAAAGCAATTCACGCTACAGAGGTTAATCTGATCAAAACTTGGGAGCTATGTACTGGTAGAATTCAATATGACCATGATGCTGGTAGCATGATCCCATACCACCAGAACCTAACTTCCAAAGGGTATCGAGCACTAATTTTCAGTGGCGATCATGATATGTGTGTTCCGTTCACCGGGAGTGAGGCGTGGACGCGATCAATGGGATACAAGATCATTGATGAATGGAGGCCCTGGCTTTCCGATGAACAAGTTGCTGGATTTACACAAGGATATGAGAATAATCTTACGTTTCTGACAATAAAGGGAGCTGGACATACTGTTCCTGAATATAAACCTAGAGAGGCATTGGATTTCTTTCAACACTTCTTGGCTGgaaaatcaatttg 1499 0.4296 MARRDTSVVLYIFLLHIFLSFVISLSAPEGALITQLPGFNGAFPSKHYAGYVTIDESHGRNLYYYFVVSESKPSQDPVVLWLNGGPGCSSFDGFVYEHGPFNFAAAKTKGGLPKLQLNPYSWSKASNIIYLDSPAGVGFSFSNNQSDYITGDLTTAADTHDFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLAYEVMKGIDSGVKPHLNFKGYMVGNGVTDNKFDGNALVPFAHGMGLISDDLYEEVVKECNGNFYDPDPTKDICREKLAKVDEVIGGLNIYDILEPCYYGTVTKDNKTSNPRLPASFRMLGETERPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSSSGDVPCTDDEVATTWLNNAEVRKAIHATEVNLIKTWELCTGRIQYDHDAGSMIPYHQNLTSKGYRALIFSGDHDMCVPFTGSEAWTRSMGYKIIDEWRPWLSDEQVAGFTQGYENNLTFLTIKGAGHTVPEYKPREALDFFQHFLAGKSI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00324 499 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Bva01g00324 499 Gene3D - 355 393 - -
Bva01g00324 499 Gene3D - 401 496 - -
Bva01g00324 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Bva01g00324 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Bva01g00324 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Bva01g00324 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Bva01g00324 499 ProSitePatterns Serine carboxypeptidases, histidine active site. 466 483 IPR033124 GO:0004185
Bva01g00324 499 Gene3D alpha/beta hydrolase 26 322 IPR029058 -
Bva01g00324 499 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 19 498 - -
Bva01g00324 499 Pfam Serine carboxypeptidase 37 495 IPR001563 GO:0004185|GO:0006508
Bva01g00324 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 498 IPR001563 GO:0004185|GO:0006508
Bva01g00324 499 SUPERFAMILY alpha/beta-Hydrolases 33 497 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00324 Bva-Chr1 2879153 2884027 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00324 360 499 Calmodulin-binding Proteins AT2G22960 48.571 4.56e-42 146