Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00317 ATGGAATTTCTGGCCGTAGCTGTTGACAAGTTATGGAATTACACCGTGGTACCTGTTGCAAGGCAGGTGGGCTATGTGATTTTCTACCACAGCAACGTTAATGACCTGAAGATGGAAGTTGCAGAACTCCAGCGCGCAAGAGAACGAGTGCAACATGAAATTGATGCTGCTGAAAGAAATGGGGAACGAATTGAAGGAGAAGTTCTGGATTGGCTGAAACAAGTGGATGAGATGAAGATGAAGGCAGATGACCTCAATAATGACGAACGCCATGCAAACACGGCTTGTTCTGGCAGATCCATTCCAAATCTGTTGTTGAGGCATAAACTGAGCAGAGGATCAAAGAAGACGAAGGAAGAAATTGTCAAAATCAAGACGAAGGGAAATTTTAATTCGGTTTCTTACAAAGTAGTTCCAATGTTAAGGGCTCCTTCCTTAATCACTCATGGTGAGCAATTCGGTTCGAGGGTTTCGGTATTCAATGACATCATGGAGTCATTGCAAGATCCTAATGTACAGAAGATTGGGTTATATGGCCTTGGAGGCGTAGGAAAGACCACTCTAGTGAAAGAGGTTGCTAACAAATCTCAACAGCAGAACTTATTTGACGTGGTAGTCTTGGCATACGTCACACAGAATCCAAAGACGGAGGAAATCCAATATCAGATTGCTGACATGTTGGGGCTCAAACTTGATGAGAAAAGCAATGATGGAAGAGCTAATCGCCTGTATGACAGGTTACTAAAGAAAGAGCAAAGAATTCTTTTAATCTTGGATGATCTCTGGGCAGAGCTTAAGTTTGATGAAATAGGCATCCCTTCTATAAAGCAACACAAGGGTTTGAAAATCCTAATGACTTCTAGAAATCGAGAAGTATTGTCTAACAACATGAAGACACAAAAAGACTTCGTCTTACAAGCCTTGACAAAAGATGAAGCTTGGAAATTATTTGTTGATAAGGCCCAGATTGATGTATCTTCTATCCATGGGGAATTATTGTTGATAGCCTCTAAGATTGCTGAAAAGTGTGATGGACTGCCAGTTGCCATTGTGACTATTGCAAGTTCACTAAAAGAAAAGGGCTTACCAGCATGGAATGATGCCTTACAACGATTACAAAATCCTTCTCCAACATATACAACAAGTACCGaggcttatatatataattttattgaagtgagttatcaaaatttagaaaatgatCTCCTCCGATCAATCTTTTTGCTTTGTGGTGAGATGACATCCATTTCTTCAATTGATGACTTGTTCAAGATTTCTTTCGGCCTAGGTTTGTTTAAAAACTTATCTAACATGAAAGAGGCTCGAAATAAGTTTGATACATGCATTGATAAGTTGAAAGATGTATGTCTATTACAAGATTCTAATTTGAGAGACAGATTTATAATGCATGATGTTGTCCAAGCTGCAGCTATATTCTTAGCATCCAGGGATGAATACCTCttcatgaaaatatatgaagaatTACAAGAGTGGCCTGAAAATGATCGCTTGCAGAATTGCAgaacaattattttacaacAAAGTAAGATGGACGAGCTTCCTGAAGAGTTAGACTATCCAAACCTCTCATTTCTTCATCTAGACATTGGTAATTCAAAATTGGAAGTGCCAGACAATTTTTTCAAAGTAATGTCTGATCTGAAAGTATTGACTTTGGTTGGACGGAGATTGAAGTCCTTGCCTccatctttcaattttttaagcaACCTTCGTACCTTATGTCTATATTCAGATtcagtttcatttttaagCAACTCTCGTACCTTAACTCTAGATCCATCAGATTCAGATTCATTTGTTTCAGAAGACATTGCAATAATAGGAGAGTTGAAGGGTTTAAAAGTTCTCACTCTTGGGTTGAGAATTCCGCAATTGCCCCAAGAGCTAGGGCAATTAACTCAGCTGCAATTACTGGACTTGAGATACTGTTTTCAACTTGAAATGATCCCACCAAATGTCTTATCAAGCTTCAGAAAATTAGTGGAGCTGTACTTCCCAGGGAATATTCAGTGGTATATTGATTATCCAAACAACCCGCAATGTAGTGCTAGTCTTGCCGAACTAGATGATTTGACTCGATTGACCACTTTAGAAATATTCATTCCTGATCAAAGGATGGTTCCAAAGGACCTTGTCCTTGAGAGGTTACAGAGGTACCACATAACCGTAGGAATAGATTTCCCTGTAAGGTTTCATAATATATCAAGGAGACTGGAACTCAATCTGAGTACCAGCATTCAATTATGGGAAAATGTCAAAAGGTTGCTTGACAATGTTGAAACTTTAGTCTTGGAAGATTTGAAAGGTGCTAAAAATGTTGTTCCCGAAATAAATGTACAAGGCATGCCACAACTAAAGAAACTCTTTGTGTCTTCTAGTGATGAAATTCAAACCATAATTGAGTCATCAGGTTTGAACCATACTAATGCTATTGATATCTTCCCCAATTTGAAGGAGTTGCAAATCAACCAGATGACCAACTTGATAAGATTATGGGATGGCCCACTTGTAGGAAAGTCCTTCTCCAGACTAAAATATATGTGGGTGTACAATTGTCCTAAAATGAAGAGTCTCTTCTCAGCTTCTATTGTTACGGAGGAAATAGTTTCAGATAATCACAAAGTGCTCAATTTTCCTCAACTGCGTTTCTTAACATTAACATCGCTGCCTGAGCTAATTAGTTTTTGTAACAATGATGAGACATATTATAGTGCTCATTCAACGCAGTTTTCAAGTGATATGGGGGACAATAGTTATTTCACTCATACAGCACTTTTTGATGATAAGGTTACATTCCCAAGCTTGGAAGAGATGACAATTAGAAATGCATATAAGTTAGATACAGTATGGCATTGGCAGCGACAACTTCGTCCAAACTCGTTTGACAAACTTAGAGAGCTTGAGATTGAAAGCTGTTCTAAACTCATAATCCTTTTTCCTAGTCACGTGGGCAACAAATTGCATAATCTAGAGACATTGTTCATTAAGGATTGTGAATCTCTAGAACAGGTATTTGATCTTCAAGGTTTGACTGCTGGTCTATTAGAAATCTTATGCTTTCCGAATTTGCAAGACATGCGTGTTGAAGGATGTAAAAGGCTAAGGTATTTGTTCCCTGCATGTGTGGCAAAGAATCTTTGTAAACTACAAAAGCTTAAAGTAAAGGAGTGTCACATGATGGAAGACATAATCTTGAAAGATGATAATACCAATCCTTCTTCCAGTGATAAGGCTATATTTCCCAATTTGGAGGAGTTGATAATTACCGGCATGGATAAGTTGAATAGGATATGCTGTTGGAACCGACAACTTCTTTATCCAAATTACATTGGAAGACTTGGAGAAGTTGGGATCAGAAACTCTCCAGAagtcatttctatttttccatGTTACAAAATAAGCACAACTCAGAGTTTGCAGAAATTGACCATCATTGATTGTAAATCTCTAGAACAAATATTTGATCTACATGGGGAGACTAGTGCTCTGCCAGTTGCAGTAAAGCAGCGGCAGGCTAAGGAAGTATCTGGATTTCCAAATTTGGAAGATATGCAAGTCGAAAGATGTGAAaggttaaaatatttgtttccaGCATTTGTAGCGAGAAGTCTTGGAAAAATCAGAAAGCTTACGATACGGAAATGTTTGAATATGGAAGAAATAATAATGGTAGAAGATAACACCCATCATTCTTTCAACAAAGAGGTTCTATTTCCCAATTTGGAGGAGATGACGATTACCAACATGGATAAATTGAATAGGATATGCTGCTGGCCGCAACAACTTACTCCAAATTCCTTTGGAAGACTTGGAGAAGTTGACATCAGAAACTGCCCAGaacttatttctatttttccatGTTACAAAATAAGCACATCTCAGAGTTTGCAGAAATTGTTCATCATTGACTGCAAATCTCTAGAGCAAATATTTGAACTTCGAGGAGTAAATGTTGGAGAAATAGATGGTGAGACTAATGGTCTACCAGTTGTAGTAAAGCAGCATCAGGCTGGAGAAGAATTGACACTTCCTTCTTTGAACAAGATGTGTATTGAAGGATGTGAGaggctaaaatatttttttccactATATGTAGCAAAAAGACTCAGCAACATTAAAAGGCTTGAAATAAGGAGATGTTCAATGATGGAAGAGATAATAATGGTAGAAGATAATATTCATCATCCTTTGAACAAAGAGATTGTGTTTCCCAATTTGGAGGAAATGATTATTTATGACATGGATAAGTTGAATACAATATGGGATATGCAGCAAAGACTTGCTCCAAATTCCTTTGGCAGACTTGAATACATTAAGATTAGAAACTGTCCGGGACTCATGTCCCTTTTTCCATGTTACGTAAAAAGTATGATTCAAAGATTGGAGTATTTCACCATCAGTGATTGTAAATCTcttgaagaaatatttgatatgACAGGGGTAAATGAAAGAGAAGCAAATGATGGGACTTGTAGTCTCCCAGTTGCAGTTAAGCAGCAACAAGCAACGAATGTGTCCTGGCTTCCCAATTTGATGAGCATTGATGTCAGAGGATGTGATGGGCTGAAATATTTGTTACCAGAAACTGTAGCAAAAGAACTTAGCAAACTTAAAAGGCTTTATACAAGGAAGTGTCCCGTAATGGAAGTCttaataacaaataacaataccAATCATTCTTCGACTGATGAGGTTCTATTTCCCAATTTGGAGAAGATAACGATTACCAACATGGATAAGTTGAATAGGATATGGAGCTGGCAGCAAAAACTTGCTCCGAATTCCTTTGGAAGtcttgaaaaaattgaaatcagaAATTGTCCGGAActtgttttcacttttccaTGTGACATAATAAGAACAACTCAGAGTTTTGAGCAGTTGATCGTTATTGACTGTAAATCTCTAGAACAGATATTTGATCCTCGAGGAGTAAATGCTGGAGAAACAGATGGTGACACTAATGGTCTACCAGTTGAAGTAAAGCCGCAGCAGTTTTTGAAGATCAATGTTAAGGAATGTGAGTgcctaaaatatttgtttccaCTATCTGTAGCAAAAAGTTTCAGGAATATCAGAAAacttaaaatagagaaatgttCGATGATGGAAGAGATAATAATGGTGGAAGATAATATCCATCCTTCTTTTTGCAAAGAGGTTGTGTTTCCCAACTTGGAGTTAATGATTATTTCTGACATGGATAAGTTGAATACAATATGTCATTCGTTCCATCTACTTCCTCCAACTTCCTTCGGTAAACTTAGGACGGTTGAGACTAGCAACTGCCCAGAATTCATTTTTCCAAGTCAGCTACAGAGTCTTGAGATGTTAAGGATAAccaattgtaaatatttagaaCAGATTTCTGGAGACACACTTGTTGCTAATTCTATATTGCTCAGCAATCCTAAATTGATGGAACTCTATGTTCCTGGATGTCATGGGCTACCATTTTTATCTTCATCATCCTTGGCAAAAAGTCTAGACAATCTTCGAGTGCTTACAATAAAGGAATGTTCCAAGATGGAAGAGATAATAAGGTTTGAAGACGATATTGATCCTCTTTTCGGCAAAACGGCTGTGTTTCCtaacttgaaagaaatgatCATCACTGACATGGCGAAGATGAATACAATATGGGGTTGGAAGCAACAACTTCCTCCAAATTCCTTTGGCAGgcttagaaaaattaagatcaGAAACTGTGAAGGGTTTTCTAAAGGACTTCCACTTTCATTATTGAAGTCATTAAACAACTTGCAAGTGCTGGAGCTTCAATCTTGTAATTCTCTTAGAGAGGTGTTTGATTTGGAGAAGGAGACCGACGTTCATGAAGATCAGACACATTGTGTGCCGAAGTCTTCCTTGGAAGCATTGCTTTTGTGTTCCCTACCCAATTTCAAGCAATTATGGAATAAAGATCCACGAGGTATTGTTGATTTTCAAAACCTATCTTCCATACATGTTTTGGAATGTGAAAGTGTGAAATATCTCTTTCCGGTCTCAATTGCCAAATCTCCCATGCGACTTCGAGAATTAAAGATAGAGTCTTGTGCTGGGCTTGAGCATATTGTTGCAGGGGAAGAAGGGACCGATACATCCATCAGTTTTGTGTTTCCTAAAGTGACCTACATGCGACTTTGGAATCTTCCAAAACTTAAAGGCTTTTATCCTGGAAGATATATTACAGAATGGCCATCATtacagaatatatattttgaaacaaatgtTGACGGGGGACCCAACTTCTGGGAATTCGAAAATCGCATTGTGTGGAGTGGTTA 6308 0.3613 MEFLAVAVDKLWNYTVVPVARQVGYVIFYHSNVNDLKMEVAELQRARERVQHEIDAAERNGERIEGEVLDWLKQVDEMKMKADDLNNDERHANTACSGRSIPNLLLRHKLSRGSKKTKEEIVKIKTKGNFNSVSYKVVPMLRAPSLITHGEQFGSRVSVFNDIMESLQDPNVQKIGLYGLGGVGKTTLVKEVANKSQQQNLFDVVVLAYVTQNPKTEEIQYQIADMLGLKLDEKSNDGRANRLYDRLLKKEQRILLILDDLWAELKFDEIGIPSIKQHKGLKILMTSRNREVLSNNMKTQKDFVLQALTKDEAWKLFVDKAQIDVSSIHGELLLIASKIAEKCDGLPVAIVTIASSLKEKGLPAWNDALQRLQNPSPTYTTSTEAYIYNFIEVSYQNLENDLLRSIFLLCGEMTSISSIDDLFKISFGLGLFKNLSNMKEARNKFDTCIDKLKDVCLLQDSNLRDRFIMHDVVQAAAIFLASRDEYLFMKIYEELQEWPENDRLQNCRTIILQQSKMDELPEELDYPNLSFLHLDIGNSKLEVPDNFFKVMSDLKVLTLVGRRLKSLPPSFNFLSNLRTLCLYSDSVSFLSNSRTLTLDPSDSDSFVSEDIAIIGELKGLKVLTLGLRIPQLPQELGQLTQLQLLDLRYCFQLEMIPPNVLSSFRKLVELYFPGNIQWYIDYPNNPQCSASLAELDDLTRLTTLEIFIPDQRMVPKDLVLERLQRYHITVGIDFPVRFHNISRRLELNLSTSIQLWENVKRLLDNVETLVLEDLKGAKNVVPEINVQGMPQLKKLFVSSSDEIQTIIESSGLNHTNAIDIFPNLKELQINQMTNLIRLWDGPLVGKSFSRLKYMWVYNCPKMKSLFSASIVTEEIVSDNHKVLNFPQLRFLTLTSLPELISFCNNDETYYSAHSTQFSSDMGDNSYFTHTALFDDKVTFPSLEEMTIRNAYKLDTVWHWQRQLRPNSFDKLRELEIESCSKLIILFPSHVGNKLHNLETLFIKDCESLEQVFDLQGLTAGLLEILCFPNLQDMRVEGCKRLRYLFPACVAKNLCKLQKLKVKECHMMEDIILKDDNTNPSSSDKAIFPNLEELIITGMDKLNRICCWNRQLLYPNYIGRLGEVGIRNSPEVISIFPCYKISTTQSLQKLTIIDCKSLEQIFDLHGETSALPVAVKQRQAKEVSGFPNLEDMQVERCERLKYLFPAFVARSLGKIRKLTIRKCLNMEEIIMVEDNTHHSFNKEVLFPNLEEMTITNMDKLNRICCWPQQLTPNSFGRLGEVDIRNCPELISIFPCYKISTSQSLQKLFIIDCKSLEQIFELRGVNVGEIDGETNGLPVVVKQHQAGEELTLPSLNKMCIEGCERLKYFFPLYVAKRLSNIKRLEIRRCSMMEEIIMVEDNIHHPLNKEIVFPNLEEMIIYDMDKLNTIWDMQQRLAPNSFGRLEYIKIRNCPGLMSLFPCYVKSMIQRLEYFTISDCKSLEEIFDMTGVNEREANDGTCSLPVAVKQQQATNVSWLPNLMSIDVRGCDGLKYLLPETVAKELSKLKRLYTRKCPVMEVLITNNNTNHSSTDEVLFPNLEKITITNMDKLNRIWSWQQKLAPNSFGSLEKIEIRNCPELVFTFPCDIIRTTQSFEQLIVIDCKSLEQIFDPRGVNAGETDGDTNGLPVEVKPQQFLKINVKECECLKYLFPLSVAKSFRNIRKLKIEKCSMMEEIIMVEDNIHPSFCKEVVFPNLELMIISDMDKLNTICHSFHLLPPTSFGKLRTVETSNCPEFIFPSQLQSLEMLRITNCKYLEQISGDTLVANSILLSNPKLMELYVPGCHGLPFLSSSSLAKSLDNLRVLTIKECSKMEEIIRFEDDIDPLFGKTAVFPNLKEMIITDMAKMNTIWGWKQQLPPNSFGRLRKIKIRNCEGFSKGLPLSLLKSLNNLQVLELQSCNSLREVFDLEKETDVHEDQTHCVPKSSLEALLLCSLPNFKQLWNKDPRGIVDFQNLSSIHVLECESVKYLFPVSIAKSPMRLRELKIESCAGLEHIVAGEEGTDTSISFVFPKVTYMRLWNLPKLKGFYPGRYITEWPSLQNIYFETNVDGGPNFWEFENRIVWSG 2102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00317 2102 SMART AAA_5 171 309 IPR003593 -
Bva01g00317 2102 PANTHER - 23 1016 - -
Bva01g00317 2102 PANTHER RPP4C3 1434 1485 - -
Bva01g00317 2102 PRINTS Disease resistance protein signature 174 189 - -
Bva01g00317 2102 PRINTS Disease resistance protein signature 343 357 - -
Bva01g00317 2102 PRINTS Disease resistance protein signature 248 262 - -
Bva01g00317 2102 PRINTS Disease resistance protein signature 637 653 - -
Bva01g00317 2102 Gene3D - 133 305 IPR027417 -
Bva01g00317 2102 Gene3D - 307 398 IPR042197 -
Bva01g00317 2102 SUPERFAMILY RNI-like 1676 1943 - -
Bva01g00317 2102 Gene3D Ribonuclease Inhibitor 500 906 IPR032675 -
Bva01g00317 2102 Gene3D Ribonuclease Inhibitor 907 1104 IPR032675 -
Bva01g00317 2102 Gene3D Ribonuclease Inhibitor 1912 2087 IPR032675 -
Bva01g00317 2102 Gene3D Ribonuclease Inhibitor 1494 1653 IPR032675 -
Bva01g00317 2102 PANTHER - 1675 1716 - -
Bva01g00317 2102 PANTHER - 1856 1954 - -
Bva01g00317 2102 Coils Coil 33 88 - -
Bva01g00317 2102 Gene3D Ribonuclease Inhibitor 1685 1884 IPR032675 -
Bva01g00317 2102 SUPERFAMILY L domain-like 957 1481 - -
Bva01g00317 2102 PANTHER RPP4C3 1349 1418 - -
Bva01g00317 2102 PANTHER - 1434 1485 - -
Bva01g00317 2102 SUPERFAMILY RNI-like 1892 2066 - -
Bva01g00317 2102 Gene3D Ribonuclease Inhibitor 1234 1489 IPR032675 -
Bva01g00317 2102 PANTHER - 1570 1658 - -
Bva01g00317 2102 PANTHER RPP4C3 1570 1658 - -
Bva01g00317 2102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 410 IPR027417 -
Bva01g00317 2102 PANTHER RPP4C3 1987 2079 - -
Bva01g00317 2102 PANTHER RPP4C3 23 1016 - -
Bva01g00317 2102 PANTHER RPP4C3 1800 1855 - -
Bva01g00317 2102 PANTHER RPP4C3 1026 1105 - -
Bva01g00317 2102 PANTHER RPP4C3 1514 1563 - -
Bva01g00317 2102 PANTHER - 1349 1418 - -
Bva01g00317 2102 PANTHER - 1987 2079 - -
Bva01g00317 2102 PANTHER - 1800 1855 - -
Bva01g00317 2102 PANTHER - 1026 1105 - -
Bva01g00317 2102 PANTHER - 1514 1563 - -
Bva01g00317 2102 PANTHER RPP4C3 1184 1231 - -
Bva01g00317 2102 PANTHER - 1184 1231 - -
Bva01g00317 2102 Pfam NB-ARC domain 161 396 IPR002182 GO:0043531
Bva01g00317 2102 SUPERFAMILY L domain-like 503 951 - -
Bva01g00317 2102 PANTHER RPP4C3 1675 1716 - -
Bva01g00317 2102 PANTHER RPP4C3 1856 1954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00317 Bva-Chr1 2804454 2818114 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00317 156 705 WRKY Transcription Factor Family AT5G45050 24.466 9.01e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00317 - - vvi:104881449 822.002