Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00313 ATGGAATTTCTGGCCGTAGCTGTTGACAAGTTATGGAATTACACCGTTGTACCTGTTGCAAGGCAGGTGGGCTATGTGATTTTCTACCACAGTAACGTTAATGAGCTGAGGATGGAAGTTGCACAACTCCAGCTTGCAAGAGAACGCGTGCAACATAAAATTGAGACTGCTGAAAATAATGGGGAACGAATTGAAGGAGATGTTCTGGATTGGATGAAACAAGTGGACGAGATGGTTCCAAAGGCAGATGACCTCAGTAACGACGAACGCCATGCAAGCACAGCTTGTTCTGGCAGATCCATTCCAAATCTGTTGTTGAGGCATAAACTGAGCAGACAatcaaagaagatgaaggaagAAATTGTCAAAATCAAGGCGAAGGGAAGTTTTGATTCGGTTTCTTACAGAGGTCCAAATTTGATAAGGGCTTCTTCCTTAACCACTCATGCCGAGAAATTCGGTTCGAGGGTTTCGGTATTGGATGACATCACAAGGGCATTGCAAGATCCTAATGTACAGACGATTGGGTTATATGGCCTTGCAGGGGTAGGGAAGACCACTCTAGTGGAAGAGGTTGCTAACAAATCTCAACAGCAGAACTTATTTGACGTGGTAGTCTTGGCATACGTCAGACAGAATCCAAAGACGGAGGAAATCCAATCTCAGATTGCTTACAAGTTAGGGCTTGAATTGAAAGAGACAAATAGTACTGTAAGAGCTAATCATTTACATAAGAGATTACtgatgaaagaagaaaaagttctTGTAATCTTTGATGATCTTTGGGCAGAGCTTAAGTTGGGTGAAATAGGCATCCCTTCTATAAAGCAGCATAAGGGTTTGAAAATCCTGATGACTTCTAGAAATCGAGAGTTATTATCTAACAGAATGAACACACAAAAAGATTTTTGTTTACAAGTCTTGACAAAATATGAAGGATGGAAATTATTTGTTGAGAAAGCCCAATTTGATGAATCTTCTGCCAATGaagaattaaaatcaattgccACTAAGATTGCCGAAAAGTGTGGTGGGCTGCCAGTTGCCATTGTGACAATTGCAAGTTcactaaagaaaaagagctcaTCATCATGGAATGATGCCTTACGACGATTACATAATCCGTCTCCCACAGATATTACAACTACTGAGGctgatttatataaatttattgaagtgAGTTATGAAAATTTAGACAATAATATCTACAGGTCAATCTTTTTACTTTGTGGTGAGATggtatttatttcttcaattgaTGATTTGTTCAAGATTTCTTTTGGCCTAggtttgtttaaaaatttatgtaacatGAAAGAGGCTCGAAATAGCTTTGATACATGCATTGGTAAGTTGAAAGACGCATGTCTATTACAAGATTCTAATTTGAGAGATAGATTTGTAATGCATGATGTTGTCCAAGCAGCAGCCATATTCTTAGCGTGCAAGCATCAATATCTGTTCATGAAAAGATATGAAGAATTACAAGAATGGCCTGGAAAACATCAACTGCAGAATTgtgaaacaattattttacatcaaaGTAAGATTGACGAGCTTCCTGAAGAGCTAGATTGTCCAAacctcacatttttttatctaaacagTGGAGATTCTTATTTGAAAGTGCCAGACAACTTTTTCAAAGGAATGTGTGGTCTGAAAGTATTGACTTTGGTTGGAAGGAGATTGAAGTCCTTGCCTCTATCTTTCAGTCTTTTAAGCAACCTCCATACCATGCATCTAGTCTCAGATTCAGATTCATTTGTTTTAGAAAACATTGCAATGATAGGAGATTCAGATTCATTTGTTTCAGAAGACATTGCAATGATAGGGGATTCAGATTCATTTGTTTCAGAAGACATTGCAATGATAGGAGATTCAGATTCATTGGTTTCAGAAGACATTGCAATGATAGGAGATTCAGATTCATTTGTTTCAGAAGATATTGCAATAATAGGAGAGTTGAAGGGTTTAAGAGTTCTCACCCTTCGGTTGTGCATTCAGCAGTTGCCCCAAGAGCTAGGGCAATTAACTCAGCTGCAATTACTGGACTTGAGATACTGCTTTGAACTTGAAATGATCCCACCAAATGTCTTATCAAGCTTGAGCAAATTAGTGGAGCTGTACCTCCCAGAGTGGATTTGGTGGTATATTGATGATCCAAACAACCAGAAATGTAATGCTAGTCTTGCCGAACTAAATGATTTGACTCGATTGACCGCTTTAGAAATATTCATTCCCGATGACAGAATGTTGCCAAAGGAACTTGTCCTTGAGAGGTTACAGAGGTACGAAATAACCATAGGAAGAGATCTCCCTGGAATGGTTTCTATTATATCAAGAATGTTTCGATCAAGAATGTTTTGTAATACATCAAGAATGTTTGGTAATACATCAAGGAAACTGGAACTCAATCTCAGTACCAGCATTCACTTATGGAAAAATGTCAAAAGGTTGCTTGACAATGTCGAAACTTTACTCTTGGAACATTTGAAAGGTGCTAAAAATGTTGTTCCCGAAATAAATGTACAAGGCATGCCACAACTAAAGGAATTTACTCTGTCTTCCAGTGAAGAAATGCAAACCGTAGTTGAGTCATCAGGGCTGAACCATGCTAATGCTACTGATATCTTCCCCAATTTGGAGCAGCTGCGGATCAGACGGATGACCAACTTGATAAGATTATGGGATGGCCCACTTGCAGGAAAGTCCTTCTCCAGACTAAAACGTATCTCTGTGGATGATTGTCCATTAATGAAGAGTCTCTTCTCAGCTTCCGCTGTTACAGAGGAAATAGTTTCAGATAATGAGAAAGTCCTCAATTTTCCTCAACTGCGTTTCTTATCATTAATACGGCTGCCTGGGCTAATTAGTTTCTGTAACGAAGATGAGACATATTCTAGTGCTCAATCAACGCAGTTTTCAAGTGACATGGGGGACAATAGTTCCTTCACTCACAAAGCACTTTTTGATGATAAGGAATGCTTTACATGCTTTTCTAGGTTTGAAATCAAAAGAAGCAAGCTGTCTTTAATTGTtgttcataaata 3053 0.3662 MEFLAVAVDKLWNYTVVPVARQVGYVIFYHSNVNELRMEVAQLQLARERVQHKIETAENNGERIEGDVLDWMKQVDEMVPKADDLSNDERHASTACSGRSIPNLLLRHKLSRQSKKMKEEIVKIKAKGSFDSVSYRGPNLIRASSLTTHAEKFGSRVSVLDDITRALQDPNVQTIGLYGLAGVGKTTLVEEVANKSQQQNLFDVVVLAYVRQNPKTEEIQSQIAYKLGLELKETNSTVRANHLHKRLLMKEEKVLVIFDDLWAELKLGEIGIPSIKQHKGLKILMTSRNRELLSNRMNTQKDFCLQVLTKYEGWKLFVEKAQFDESSANEELKSIATKIAEKCGGLPVAIVTIASSLKKKSSSSWNDALRRLHNPSPTDITTTEADLYKFIEVSYENLDNNIYRSIFLLCGEMVFISSIDDLFKISFGLGLFKNLCNMKEARNSFDTCIGKLKDACLLQDSNLRDRFVMHDVVQAAAIFLACKHQYLFMKRYEELQEWPGKHQLQNCETIILHQSKIDELPEELDCPNLTFFYLNSGDSYLKVPDNFFKGMCGLKVLTLVGRRLKSLPLSFSLLSNLHTMHLVSDSDSFVLENIAMIGDSDSFVSEDIAMIGDSDSFVSEDIAMIGDSDSLVSEDIAMIGDSDSFVSEDIAIIGELKGLRVLTLRLCIQQLPQELGQLTQLQLLDLRYCFELEMIPPNVLSSLSKLVELYLPEWIWWYIDDPNNQKCNASLAELNDLTRLTALEIFIPDDRMLPKELVLERLQRYEITIGRDLPGMVSIISRMFRSRMFCNTSRMFGNTSRKLELNLSTSIHLWKNVKRLLDNVETLLLEHLKGAKNVVPEINVQGMPQLKEFTLSSSEEMQTVVESSGLNHANATDIFPNLEQLRIRRMTNLIRLWDGPLAGKSFSRLKRISVDDCPLMKSLFSASAVTEEIVSDNEKVLNFPQLRFLSLIRLPGLISFCNEDETYSSAQSTQFSSDMGDNSSFTHKALFDDKECFTCFSRFEIKRSKLSLIVVHK 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00313 1017 PRINTS Disease resistance protein signature 174 189 - -
Bva01g00313 1017 PRINTS Disease resistance protein signature 676 692 - -
Bva01g00313 1017 PRINTS Disease resistance protein signature 248 262 - -
Bva01g00313 1017 PRINTS Disease resistance protein signature 343 357 - -
Bva01g00313 1017 Pfam NB-ARC domain 161 396 IPR002182 GO:0043531
Bva01g00313 1017 PANTHER PHOSPHATASE, PUTATIVE-RELATED 645 930 - -
Bva01g00313 1017 PANTHER PHOSPHATASE, PUTATIVE-RELATED 8 599 - -
Bva01g00313 1017 PANTHER - 8 599 - -
Bva01g00313 1017 SUPERFAMILY L domain-like 498 940 - -
Bva01g00313 1017 Gene3D Ribonuclease Inhibitor 473 594 IPR032675 -
Bva01g00313 1017 Gene3D - 135 305 IPR027417 -
Bva01g00313 1017 Coils Coil 107 127 - -
Bva01g00313 1017 Gene3D Ribonuclease Inhibitor 634 748 IPR032675 -
Bva01g00313 1017 Gene3D Ribonuclease Inhibitor 789 978 IPR032675 -
Bva01g00313 1017 PANTHER - 645 930 - -
Bva01g00313 1017 Coils Coil 33 67 - -
Bva01g00313 1017 CDD AAA 154 287 - -
Bva01g00313 1017 Gene3D - 308 398 IPR042197 -
Bva01g00313 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 410 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00313 Bva-Chr1 2748432 2751485 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00313 168 744 WRKY Transcription Factor Family AT5G45050 24.032 1.74e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00313 - - qsu:112034360 539.65