Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00311 ATGTGTAAGCTCAGTGCAGTTGAATTGAGTCCTGGCTTTTGCATTGCTCAATCAATGGATAATTCCATTTCAATCGGAGAAGATGGGAACAGTGACATTATAGAGAGTTCTAGTGGAAAAGCATTGATTACGGGTGAAGGAGCTAGTTCCATGGAACCTTATGTAGGTATGGAATTTGAGTCAGAAGAGTCTGCCAAAGTGTTCTATGATGCATATGCCACTCGCCTGGGATTCATCATGCGTGTTGATGCATTTCGAAGATCAATGCATGATGGAAAGGTTGTTTGGCGTCGACTTGTGTGCAACAAAGAGGGTTTTCGTAAGCTGAGATCTAAACGAAGTGAAAATAGGAAACCTCGAGCAATCACCAGAGAAGGTTGTAAAGCGATGATAGTagttaagaaagagaaaacaggAAAATGGGTTGTTACAAGATTTGTTAAAGAGCATAATCATCCCCTGGTAGTTACCCCATCCAATAATCGTCGAAGTATGCTTCTATCTCAAACCCCAGACGAGAAAGATGTGAAGATTCGAGAATTGACTGCCGAGTTACAGCGCGAGAGGAAGCGAAGTGCAGTCTTACAAGAACAACTTGAGATGGTTTTGAGAGATATGGAGGAACATTGCAATTATCTATCAAGAAACATTGATGATGTTGTTCAAAGTGTGAGAGAAATAGAATCACAGATCGAAAAACATCCCTG 707 0.4003 MCKLSAVELSPGFCIAQSMDNSISIGEDGNSDIIESSSGKALITGEGASSMEPYVGMEFESEESAKVFYDAYATRLGFIMRVDAFRRSMHDGKVVWRRLVCNKEGFRKLRSKRSENRKPRAITREGCKAMIVVKKEKTGKWVVTRFVKEHNHPLVVTPSNNRRSMLLSQTPDEKDVKIRELTAELQRERKRSAVLQEQLEMVLRDMEEHCNYLSRNIDDVVQSVREIESQIEKHP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00311 235 Coils Coil 178 205 - -
Bva01g00311 235 Pfam FAR1 DNA-binding domain 68 155 IPR004330 -
Bva01g00311 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 230 - -
Bva01g00311 235 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 33 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00311 Bva-Chr1 2733569 2736943 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva01g00311 FAR1 2.2e-33 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00311 - - qsu:111997347 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00311 01 2733569 2736943 Bva02g01019 02 14487269 14489562 BWGD