Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00310 ATGGAGTATTGGGTTTTGGATTTGGAGGCTTTACCTGAAACTGTTGAAAGTTCTGCCGAGGAAAAATCAGCAGCATGTGAAGAGGGTTCCATTATTGAACCATATGTTGGTATGGAGTTTGATTCTGAAGAGTCTGCAAGGAAATTTTATAGTGAATATGCAAGGCGTGAGGGTTTCATCGTGCGTCTTGATCGGTGTCACCGTTCTGAGGTTGACAAGAGAATCCTGTCTCGCCGCCTTTCATGTAACAAGCAAGGCTTTTATGCAAAAGCTAGAGATGGAGCCAGGGGAGTTCGGAAACCAAGAGTTAGTATAAGAGAAGGCTGTGAGGCAATGGTGTTGGTTAAAGTTAATAAATCCGGAAGATGGGTTGTTACTCGATTTGTGAAAGAACATACTCATCCTCTAAGTTTGCCTGGTCGACCTTCTTCTAGAAATGTGGAGTTAAAGGATAAGAAGATTCAGGAACTCACCGAGGAGCTTGAGCGTCAAGATCAACTGTGTCAACTATATCGCGAACTGCTAAATTCCCTTCTGAAAAACGTTGAAGAGCAGACAGAAGTGTTGTCAGAAAAGCAAGAACTTGTTATCAGCACCATTAAACAACTTGAGAATGCAGTTAAAAGACCTTCAGAAGCTGATCGATA 647 0.4219 MEYWVLDLEALPETVESSAEEKSAACEEGSIIEPYVGMEFDSEESARKFYSEYARREGFIVRLDRCHRSEVDKRILSRRLSCNKQGFYAKARDGARGVRKPRVSIREGCEAMVLVKVNKSGRWVVTRFVKEHTHPLSLPGRPSSRNVELKDKKIQELTEELERQDQLCQLYRELLNSLLKNVEEQTEVLSEKQELVISTIKQLENAVKRPSEADR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00310 215 Coils Coil 147 195 - -
Bva01g00310 215 Pfam FAR1 DNA-binding domain 48 136 IPR004330 -
Bva01g00310 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 212 - -
Bva01g00310 215 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 5 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00310 Bva-Chr1 2730871 2732920 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva01g00310 FAR1 8.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00310 - - vvi:100248330 257.299