Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00297 ATGGTTATGGGAAACCAAATTTTAAGTGCTCATATTGTTATGGTTGTGTGGCTGCTGCTAAGTTGTAGTATCACCTACGGGAGTGAGAATGATATCTCTTGCTTGAAAAGTATTAAAGCTTCACTTCAAGACCCTAATAAATATTTGCAGTCTTCCTGGGATTTCAACAACAACACAGAAGGCTTTATCTGTAGGTTTACTGGAGTTGAATGTTGGCACCCTGACGAGAACAGAGTTCTAAATCTCAAGCTTTCAAATATGGGACTCAAGGGCCAGTTTCCCCGTGGGATTAAGAACTGCACAAGCATAACCGGATTAGATCTTTCAATGAATAAGCTTTCTGGAACCATTCCAGAAGATATTTCTAAAGTTGTTGAGTATGTCACAAGTCTTGATCTCtcttcaaatgatttttcagGGGAGATCCCTGAGAACCTTTCCAATTGTACCTATCTTAATTCTATTAAACTTGACCAAAATCGGCTATCAGGTACAATTCCTGCCCAACTTGCTACGCTTGGACGGCTCAAGACATTTTCTGTTAGCAATAATCAATTGACAGGGCCAGTTCCAAGCTTCCCAAGTAGTGTAGATATATCAGATAGTTATGCAAATAATCCAGGACTCTGTGGTGGTCCCTTAAAGGCTTGTCAGGGCAAGTCATCCAAGAGTAACACTGCAGTTATAGCTGCAGCAGCTGTTGGTGGGGTGACCTTTGCTGCATTATGTTTGGGTGTTGGTATGTTCTTCTATGTGCGCCGTGTTGCTgtgagaaagaaggaagaggacccagaagaaaacaaatgggCAAGAATCTTAAAGggaactaaaaaaattaagGTCTCTATGTTTGAGAAGTCAGtctcaaaaatgaaattgagtGATCTAATGAAGGCTACGAGCAACTTCAGTAAAGGCAATATTATAGGGTCAGGAAGAACAGGAACTGTATACAAAGCTGTCCTTGATGATGGCACATCGTTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTTCTTTCCGAGATGGCTACGCTGGGCACTGTCAGACATCGTAATCTGGTTTCCCTTTTAGGTTTTTGCGTGGCCAAAAAGGAGAGGCTTTTGGTCTTTAATGATATGCCAAATGGTACCCTCCATGATCAGTTACATTCTGCTGCAGCTGAAGGGAGAACCATGGAGTGGACTTTAAGGCTCAAAGTTGCAATTGGAGCAGCAAAAGGATTAGCATGGCTTCATCACAGCTGCAACCCCAGAATTATTCACCGAAACATAAGTTCTAAGTGCATCTTGTTGGATGCAGATTTTGAGCCCAAAATTTCTGACTTTGGCCTCGCTAGGCTGATGAATCCAATTGATACCCATTTGAGTACCTTTGTAAATGGCGAGTTCGGGGATTTAGGCTATGTTGCTCCTGAGTATACAAGAACATTGGTGGCTACACCCAAGGGGGATATTTACAGTTTTGGCACTGTCCTTCTTGAGTTGGTGACAGGTGAGAGGCCTACTGAAGTCTCTAAAGCTCCTGAAACTTTCAAAGGAAATCTGGTAGAATGGATCACCCAACTTTCAAGCAACTCACAGCTCCATGACGCCATTGACAAATCATTGGTTGGCCAAGGTTTCGACAGTGAGCTTTTTCAGTTTCTTAAGGTTGCATGCAATTGTGTTTCTTTAAATCCAAAGGAGAGGCCCACCATGTTTGAAGTGTACCAGCTTCTAAGAGCTATTGGGGGTCGATACAATTTCACAACCGAAGATGATATATTGGTGCCTACTGAACCTGGTGATGCTGATAATTTAGAGGAACTCATTGTAGCTCGAGAAGATTTCAGTTG 1850 0.4032 MVMGNQILSAHIVMVVWLLLSCSITYGSENDISCLKSIKASLQDPNKYLQSSWDFNNNTEGFICRFTGVECWHPDENRVLNLKLSNMGLKGQFPRGIKNCTSITGLDLSMNKLSGTIPEDISKVVEYVTSLDLSSNDFSGEIPENLSNCTYLNSIKLDQNRLSGTIPAQLATLGRLKTFSVSNNQLTGPVPSFPSSVDISDSYANNPGLCGGPLKACQGKSSKSNTAVIAAAAVGGVTFAALCLGVGMFFYVRRVAVRKKEEDPEENKWARILKGTKKIKVSMFEKSVSKMKLSDLMKATSNFSKGNIIGSGRTGTVYKAVLDDGTSFMVKRLQESQHSEKEFLSEMATLGTVRHRNLVSLLGFCVAKKERLLVFNDMPNGTLHDQLHSAAAEGRTMEWTLRLKVAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTEVSKAPETFKGNLVEWITQLSSNSQLHDAIDKSLVGQGFDSELFQFLKVACNCVSLNPKERPTMFEVYQLLRAIGGRYNFTTEDDILVPTEPGDADNLEELIVAREDFS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00297 616 Pfam Protein kinase domain 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00297 616 SUPERFAMILY Protein kinase-like (PK-like) 280 578 IPR011009 -
Bva01g00297 616 ProSiteProfiles Protein kinase domain profile. 303 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00297 616 PANTHER RECEPTOR-LIKE PROTEIN 55 5 592 - -
Bva01g00297 616 Gene3D Ribonuclease Inhibitor 24 93 IPR032675 -
Bva01g00297 616 Gene3D Ribonuclease Inhibitor 94 226 IPR032675 -
Bva01g00297 616 CDD STKc_IRAK 309 578 - -
Bva01g00297 616 Pfam Leucine rich repeat N-terminal domain 29 72 IPR013210 -
Bva01g00297 616 Gene3D Phosphorylase Kinase; domain 1 265 376 - -
Bva01g00297 616 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 592 - -
Bva01g00297 616 Gene3D Transferase(Phosphotransferase) domain 1 378 593 - -
Bva01g00297 616 SUPERFAMILY L domain-like 28 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00297 Bva-Chr1 2670967 2674181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00297 12 592 Receptor kinase-like Gene Family AT3G28450 45.997 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Bva01g00297 Pkinase 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00297 - - adu:107486093 944.495