Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00287 ATGGATTGGGGTCGGCCAGTTTTTCCTATATTTTCTGATGTAGAACCTTTTGAGGTACGACATCAAACGGGTATCATCGGAAaagcatttgaaaattttgtaaagaaaagGTCCATAAGTGATGATGACGCAGGGGAATGGAGGAAAGCACTAACTGAAGCTGCAAATTTGTCTGGATTCCATTGGAGAAATTACAGCCTCATAACTATTGATGACAAAAACAAACTTGAAATGCATGATTTGCTGTGGGACATAGGATGGGAAATAATTCATCAACAATCACCAGAGGAGCCAAGTCAACATACCAGATTATGGTGTCACGAGGAAGTACTTCATGtattaaaaacatatacaGCAACACAAGCTGTTAAAGGACTTGCATTGAGCATGCCAAGAACTGATAGAGTTTGTCTGAGAAATCCTTTGAGTTCTCTTCTGATTCATATGAGAGTACGCAACAAAGTCATTGATGCAGTTAAAGAGTACATCTTACAGGGACCTTCTTTTCATCTTGGTGATAATTATCCTCATTGGCTAACTTTCACAAGTGAAGGGTCATCAATATTGTTTAAAGTCCCTCAAGTTAGTGGTTTTACCTTGAAAGGGATGACTTTCTACATCTTGTATTCCTCTAATTGTTTGGACAGTGTTGTATCTGACTTTCTTAAGGTTATGCTGTTGATTAATCTGACAAAAGGTATCGTTCAGCTTCATAAGAGAGATGCAATAACAACTACCTATGAAGATGAGGAATGGCAGGGCATGATACCAAATTTTGAACCTGGTGATGATGTAAAGGTTATACTTGTATTTGGAGATGGATTCATTGCGAAGAACAAaacattgtttttgttatacGGCGAATTGAAGGAGGAAAGAGAGGGACTGACATTAGAAGATCAGATGGCTCTTCTGTCAATTGATGAAAATGTTTA 935 0.3636 MDWGRPVFPIFSDVEPFEVRHQTGIIGKAFENFVKKRSISDDDAGEWRKALTEAANLSGFHWRNYSLITIDDKNKLEMHDLLWDIGWEIIHQQSPEEPSQHTRLWCHEEVLHVLKTYTATQAVKGLALSMPRTDRVCLRNPLSSLLIHMRVRNKVIDAVKEYILQGPSFHLGDNYPHWLTFTSEGSSILFKVPQVSGFTLKGMTFYILYSSNCLDSVVSDFLKVMLLINLTKGIVQLHKRDAITTTYEDEEWQGMIPNFEPGDDVKVILVFGDGFIAKNKTLFLLYGELKEEREGLTLEDQMALLSIDENV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00287 311 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 60 IPR035897 -
Bva01g00287 311 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 156 286 IPR044974 GO:0006952
Bva01g00287 311 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 138 IPR044974 GO:0006952
Bva01g00287 311 Gene3D - 2 82 IPR035897 -
Bva01g00287 311 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 156 286 - -
Bva01g00287 311 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 66 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00287 Bva-Chr1 2522929 2526735 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00287 66 130 WRKY Transcription Factor Family AT4G12020 35.385 8.49e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00287 - - mtr:MTR_7g055970 129.028