Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00285 ATGCgcactttcttcttcttcgttttcttGCTCTTATCTTCTGCGCCTCAGGTTTTGAACTCAGCACCTTTTGTTTCTCTCAGCCGGAGAATTCTTCATCAGCCATTGGTTCCATTGGACACTATACCTCCTGCTCAGCCTCCGAATCCTCCTCCACCGTCTCCTCCGGTGCCGGCGCCGCCGAAGCCGAAGTACCCTTTTTCTACTACTACTCCTAACTCGCCATTTTTCCCTACCTACCCTTCTCCGCCCCCTCCTCCATCGCCGGCTAGTTTTGCTTCTTTTCCTGCTAATATCTCCTCTCTTATCCTTCCTCAGGCACCCAAATCGAAATCCTCTTCTGGGAAGCTCCTCGGAGCTGCTATTGCTTCCGTTCTCGCTGCACTCGTTGTTGTCGGCCTTTCTGCTTTCTTCTACTGCCGGCGGAGGAGGACCCGTTACTCTGCTGATGAGAAGAATCTCAGATCCGATAGTAGTCTCAGGCTTTTTCCAGACAATGCAGATACCAACAATGGAAGTCGCAAGGTTAGACACACTTCTTCGACTAGCTCAGAGTTCCTATATTTGGGTACGATTGTTAATTCACGAGGTATAGACGATCGTACTGATTCTCGTAACAatgatggtggtggtggtggtggttcGGACCCTCGGAAAATGGACTCGCCGGACCTTCAACCGCTTCCGCCTCTACTCCGGCAAGCTTCCATACAGCACCTATCCCATAATGATGTGAGTTCGACTGTagatgaggaagaagaagagtttTACTCGCCGAAAGGGTCTTTGGGTGATAGGGAGAGCTCAAGTGGTACTGGATCAGGTTCTCGGAGAGTGTTTGCGGCCATAGCTGACGAGAATTCTGGTGGAAGAAGTAGCAATTCCAGTTCCAGTTCGTATTCCTCTTCTATTTCAGGTTCACCGGATCGTTCCCATTCGATTAGCTTCTCGCCACCGGTGAGTTTAAGCCCCAGAAGATCAGAACCCAAATCACCGGAAGCTCCAACGGTCGAGAGTCCTCTTCCCCCGCCGTTGCCACCGCCACCTCCTCCTTCGCAACCCCAGAATGGAACACATGTGGTTGATGAAACAAGGTGTCCGTCATCGTCATCACTCTCATCTCCGGACAGAAACCGAGTTTTATCACCTGCATTATCCCCTGTCTACAACCAATACGTGcaatcttcttcatcttcaaccCCAGAGAGAGCTTTTGGTCTAGGTACCCAGTCTCCTTCACTGTCTCCGCTTTCATTATCATCCAGTAGAGCTGTGCAGAAGAACCCAGATGCTGAAGTTCTAGTGagagcttcttcttctccgTCTCTTGCTTCTTCATCACCGGAGAGAAATGTGGAGAAAATTTCCCATGCTTCACCTAGATTATCCAATGCTTCAGAGTTTTCATTACCACagagaaatttggaaaaaatttcttatgatTCTCCTAGATTGTCCAATGCTTCGGATCGTTCATTACCAGAGAAAAATGTGGAGAAAATTTCATATGGGTCCCCCGGATTATCCAATGCTTCGAATCATCCATCACCAGATAGAAGTGTGGAGAAAATTTCGCATCAGTCACCAAGATTATCCAATGCTTCGGATCAAGGTGGCAAGTCTGAGTCGTCTTCTTCAGCTTTCTCTCTGCCTTCGTCGCCGGAAAAGGTGTTTGAGCAAAGTTTAGTAGATCAGTCTCCGAGAATATCAAGTTTTTCGGATCGGTATGGGCAATCTCCGCTACCATCTAGGTCTTTTTCACCGACCCTACTTTCATCACCAGAGATAGAATTGAACTTCTCTTCAAATCAACCAGCAATacttgaaaatgtttttggtCAAAGTAGAGAATCTCCAGCTCCTCCTCCTCCCACATCACAGAGGAAACACTGGGAAATTCCAGTGCTTGCAAAACCCATTATTCAGCCTCTTAGAGTTTCACCTCCTCCGCCACCGCCACCACCACCTCCACCTCAACCTTCTTCAGCTTCACGGCAGAGGAAACAATGGGAAATTCCAGCCTCTTCAACACCCACAACATCAGTAACACCTGCAACACCTGTTGGTCAGCCCATTTCGAGGCCACCAGAATTAATACCTCCTTCAAGGCCCTTTGTTTTGCAAACCCCAACAACAAATGTTTCTCCAGTTGAACTGCcaccaaattctcaaaatgtgGGTGTAACTGAGGAGACCTCAAAGCCGAAGTTAAAGCCACTCCATTGGGATAAAGTGAGAGCGAGCTCTGATCGTGAAATGGTGTGGGATCACTTGAGGTCGAGCTCTTTCAAATTGAATGAAGAAATGATTGAAACATTGTTTGTTGTGAACACACCTAATCCAAAACCAAAGGATACTACTCCACGATCGGTTCTCCCCCCACCACATCCTGATGACAGAGTACTTGATCCTAAAAAGTCACAAAATATTGCAATTTTGCTAAGGGCACTTAATGTGACCGTAGAAGAAGTTTGTGAAGCACTGTTAGAAGGTAGTGCTGATACACTTGGAACAGAACTCCTTGAAAGCTTGTTAAAGATGGCACCAAGCAAGGAAGAAGAGCGTAAATTGAAGGAACACAAAGATGACTCACCAGCTAAGCTTGGTCCTGCTGAGAAATTTCTAAAGTCAGTTCTTGATGTACCTTTTGCATTCAAAAGGGTGGAAGCAATGCTTTACATAGCCAATTTTGAGTCTGAAATGGAGTATCTCCGGAAATCTTTTGAAACTCTAGAGGCTGCATGTGAAGAGCTGAGAAACAGTAGAATGTTTTTGAAGCTTTTAGAGGCTGTTCTTAAAACCGGGAATCGCATGAATGTGGGGACTAACCGGGGGGATGCCCAGGCCTTCAAGCTTGATACACTTCTCAAGCTTGTTGATGTCAAAGGCGCAGACGGAAAAACCACTCTACTTCATTTTGTTGTACAAGAGATCATAAGAACCGAAGGTGCTCGGCTCTCCGGCACCAATCAAACTCCAAACACTACTTTGAATGAAGATGTCAAGTGCAGAAAACTTGGCCTACAAGTTGTTTCTAGTTTGAGTTCAGAGCTAGCAAATGTGAAGAAGTCTGCCGCTATGGATTCTGAAGTGCTCAGCAATGACATTTTCAAGCTTTCGAAAGGAATTGCAAACATCGTTGAGGTTGTGCAATTAaatgaaacaacaaaatcagATGAAACCGGTCAGAAATTTTCTGAATCAATGAACAAGTTCATGAGAATGGCTGAGGAGGAGATTCTAAAAATCCAAGCCCAAGAAAGAGTTGCTTTATCCCTAGTCAAGGAGATTACGGAGTACTTCCATGGAAACTTAACGAAGGAAGAAGCTCATCCTTTCAGAATCTTCATGGTGGTAAGGGACTTTTTATCGGTTCTCGACCGGGTCTGCAAAGAAGTTGGCATGATAAATGAGAGAACCATGTTTAGTTCTGCTCATAAATTCCCAGTTCCAGTGAATCCAATGCTTCCACAACCACTTCCTGGGTTAACTGGAAGGAGACAATACAGTTCTTCAGATGATGATAGTCCATCTTCTTA 3539 0.4357 MRTFFFFVFLLLSSAPQVLNSAPFVSLSRRILHQPLVPLDTIPPAQPPNPPPPSPPVPAPPKPKYPFSTTTPNSPFFPTYPSPPPPPSPASFASFPANISSLILPQAPKSKSSSGKLLGAAIASVLAALVVVGLSAFFYCRRRRTRYSADEKNLRSDSSLRLFPDNADTNNGSRKVRHTSSTSSEFLYLGTIVNSRGIDDRTDSRNNDGGGGGGSDPRKMDSPDLQPLPPLLRQASIQHLSHNDVSSTVDEEEEEFYSPKGSLGDRESSSGTGSGSRRVFAAIADENSGGRSSNSSSSSYSSSISGSPDRSHSISFSPPVSLSPRRSEPKSPEAPTVESPLPPPLPPPPPPSQPQNGTHVVDETRCPSSSSLSSPDRNRVLSPALSPVYNQYVQSSSSSTPERAFGLGTQSPSLSPLSLSSSRAVQKNPDAEVLVRASSSPSLASSSPERNVEKISHASPRLSNASEFSLPQRNLEKISYDSPRLSNASDRSLPEKNVEKISYGSPGLSNASNHPSPDRSVEKISHQSPRLSNASDQGGKSESSSSAFSLPSSPEKVFEQSLVDQSPRISSFSDRYGQSPLPSRSFSPTLLSSPEIELNFSSNQPAILENVFGQSRESPAPPPPTSQRKHWEIPVLAKPIIQPLRVSPPPPPPPPPPPQPSSASRQRKQWEIPASSTPTTSVTPATPVGQPISRPPELIPPSRPFVLQTPTTNVSPVELPPNSQNVGVTEETSKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSVLPPPHPDDRVLDPKKSQNIAILLRALNVTVEEVCEALLEGSADTLGTELLESLLKMAPSKEEERKLKEHKDDSPAKLGPAEKFLKSVLDVPFAFKRVEAMLYIANFESEMEYLRKSFETLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAQAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTNQTPNTTLNEDVKCRKLGLQVVSSLSSELANVKKSAAMDSEVLSNDIFKLSKGIANIVEVVQLNETTKSDETGQKFSESMNKFMRMAEEEILKIQAQERVALSLVKEITEYFHGNLTKEEAHPFRIFMVVRDFLSVLDRVCKEVGMINERTMFSSAHKFPVPVNPMLPQPLPGLTGRRQYSSSDDDSPSS 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00285 1179 PANTHER FORMIN-LIKE PROTEIN 1 6 1178 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 40 68 - -
Bva01g00285 1179 SMART it6_source 727 1141 IPR015425 -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 642 733 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 1156 1179 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 689 703 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 159 180 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 503 518 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 241 588 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 643 662 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 335 355 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 526 588 - -
Bva01g00285 1179 ProSiteProfiles Formin homology-2 (FH2) domain profile. 727 1152 IPR015425 -
Bva01g00285 1179 Pfam Formin Homology 2 Domain 730 1126 IPR015425 -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 1164 1179 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 356 492 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 287 324 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 38 88 - -
Bva01g00285 1179 Coils Coil 894 921 - -
Bva01g00285 1179 Gene3D Formin, FH2 domain 728 1135 IPR042201 -
Bva01g00285 1179 SUPERFAMILY Formin homology 2 domain (FH2 domain) 648 1138 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 663 688 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 197 229 - -
Bva01g00285 1179 PANTHER FORMIN-RELATED 6 1178 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bva01g00285 1179 MobiDBLite consensus disorder prediction 148 180 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 705 731 - -
Bva01g00285 1179 MobiDBLite consensus disorder prediction 777 803 - -
Bva01g00285 1179 CDD TM_EGFR-like 111 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00285 Bva-Chr1 2489256 2494569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00285 29 345 FH2 protein (formin) Gene Family AT3G25500 45.509 9.53e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00285 - - zju:107403251 1066.99