Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00258 ATGTGCAGCCCCGAAATCGACCGATCGGTTTCCCATCAAGCCCTAGCCAACTCTCACTTCTCAGGCAGTGGCAGCCATCATAATCATTCCCATAAGAAACCTTCATCCTCAAGAAACTTTGCGGGCAACCCCAGAATTTGGAGCAAAAACGATGCGTGCAGCAACATGGTTGAACCGGGTGGGAGTAGTCCGTACTACAAAGGTTTAACTGATCAGTCTCTTGCCATTTATAAAACAGGACAATCACAACTAGCATCATCATCGTCATCGGATTATAATCGAAATCGGCACCCTAGCAATGTCCCTCTTGCTTCGCATGAGTGTAGCCGATACTACAGAGGCCTTATAGATTATACTCTTGCCATTTCTGCAAAGCAACTAGCTTCTGGTGGCTCATACCATGAACTTGATCACAGCTTCCACAGTGGTGGTTCCCACCCTTGTGAGTGTAGTCCGTACTACAAAGGCCTCACTGATTATACCCTTGCTCTCCTTGCATCGCACGGTTCATCTGCTTCCCCTGGAGTTGGTAGTAACCCTAATTTCATAACTATTCCTTTGAATCCTTTGACCTTGTGCTTCACTAGATTAAACGCCGGACCCGGATTTAATTCCTCGTCATCATCGAAGGGCAAGACCGATGATTTGAATCGGACGGTGTTGGAGAGGAAGGAGGTTAATCATGATCTgggatttttaattgaagagGAGCAATTGAGGGAGAGAGTTTCAGAGTCATGCATGGTTGAGAaattggaagaagaagaagaagaaataacagaGAAGCCCTTGAGAGAGAGTATATCTGTTTCTGAACAAGGAGTTGCATCAGAGTTAACATTGAAAAATGAGTATGAGAAGCAAGAGAAGTACACATGGGAAAATAAGTACCAGCCGAAAACCTTGGGAGACTTCATCTGTAATAAAGAGAAAGCATTTATGCTGCAAGAATTGGGAGAAATGGTTGCTAGGATTGAAATGAGGATTAAAAGGTCGACCCACCATGTGGAGGTCAATCTCTCAGATACAAAAGGATATGAGAAGCATGTCCTTGTTGATCTGTTCAATGAAACATACGAGAAATTGCTTAATTCCTCAGCACCTCATAGTTATGAAAACTGCCATGcaATCGTCCTGTATGAGTCAGAAAAGCTATCAACAGAATCTTTATTGTACATTAAGTGGCTGCTAGAAAAGTATAAAGGCACAGGGTGTCATAAGGTCTTCTTTTGCTGCTCTGATCGATGTAAGCTTCAAGCTGTAAAAGCACTTTGCACCACTGTCAAGCTTGCACCTCCTACATGCGAAGATATAGTTAGTTTTTTGAAGTTTATAGggcaacaagaagaaattgaattgcCCCACAACTTGGCTGTCAAGATAGTTGAGAAGTCGAAAAACAATCTTCGCCAAGCAATTCGTTCATTTGATGCTACTTGCCAAAACAAGCTTCCTCTTGAAGAAGATCAAGTGATTTTAACAGGATGGgaagatgaaatttcaaatattgcCAAGAGTACAATTGAAGAGCAAAGTACCAAAcaGTTATACAATATTCGAAGAAAGCTTCAAAATCTGATGATTCATAATGTTTCtcctagttttatttttatgTGTCTCGAAGCAGACTTGAAATCTCTAGTGGATGAACCACTAAGGCCAGGGGTTGCCAAACTCTGCAAGGAATACAATGGAGAAGCAGTGCAAAGCAACAGTGGACAAACAAGAAAGGATGCTATAAGTTATTTGAAACTTGAAGAGTTCATAGCAAGATTCATGGGCTGGTACAAGAATTCATCAGGAACAAGTAGTGAGAATGTACAACTTGAAGTTGCAACATA 1841 0.3954 MCSPEIDRSVSHQALANSHFSGSGSHHNHSHKKPSSSRNFAGNPRIWSKNDACSNMVEPGGSSPYYKGLTDQSLAIYKTGQSQLASSSSSDYNRNRHPSNVPLASHECSRYYRGLIDYTLAISAKQLASGGSYHELDHSFHSGGSHPCECSPYYKGLTDYTLALLASHGSSASPGVGSNPNFITIPLNPLTLCFTRLNAGPGFNSSSSSKGKTDDLNRTVLERKEVNHDLGFLIEEEQLRERVSESCMVEKLEEEEEEITEKPLRESISVSEQGVASELTLKNEYEKQEKYTWENKYQPKTLGDFICNKEKAFMLQELGEMVARIEMRIKRSTHHVEVNLSDTKGYEKHVLVDLFNETYEKLLNSSAPHSYENCHAIVLYESEKLSTESLLYIKWLLEKYKGTGCHKVFFCCSDRCKLQAVKALCTTVKLAPPTCEDIVSFLKFIGQQEEIELPHNLAVKIVEKSKNNLRQAIRSFDATCQNKLPLEEDQVILTGWEDEISNIAKSTIEEQSTKQLYNIRRKLQNLMIHNVSPSFIFMCLEADLKSLVDEPLRPGVAKLCKEYNGEAVQSNSGQTRKDAISYLKLEEFIARFMGWYKNSSGTSSENVQLEVAT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00258 613 Gene3D - 435 494 - -
Bva01g00258 613 SUPERFAMILY post-AAA+ oligomerization domain-like 495 595 IPR008921 GO:0003677|GO:0006260
Bva01g00258 613 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 316 600 - -
Bva01g00258 613 PANTHER OS10G0574500 PROTEIN 316 600 - -
Bva01g00258 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 292 490 IPR027417 -
Bva01g00258 613 MobiDBLite consensus disorder prediction 17 44 - -
Bva01g00258 613 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 217 318 - -
Bva01g00258 613 Gene3D - 495 595 - -
Bva01g00258 613 PANTHER OS10G0574500 PROTEIN 217 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00258 Bva-Chr1 2049401 2054528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00258 319 598 Core DNA Replication Machinery Family AT5G27740 28.622 1.97e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00258 K10756 - gmx:102664389 385.185