Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00247 ATGGAATCTTTAGAAGTGAATTGGAAGCCAAGTATCGGCATGGAATTTGATAATGTTGAAGCGGCTTGGCAATTTTGGGTTGAATATGgcaaaaaaaatggatttggAGTTAGACAACAATACAAGAACAAAAATGTGGATGGCTCTATTAGATCATATAGATTTGTTTGTTGCAAGGAGGGTCATCAAGAAGTGGACAAGAGATTAGTTAAGAAGCccacaaaagaaacaagaactGGTTGCAAATCAAGAATTGCACTTTCCTTAAAGAATGGAAAGTTTGTAATTCATGAATTTGTGGAAGCTCATAACCACCTTTTACAACTTCTGGAAACAACACATATGCTAGCATCACATCGTAAAATTTCTAAAGCTCAAGCATATGAGATTGAAATGGCAAAGAACTCTGGATTGGTGCAAAATGATTCATTTCAACTTATGAGCACATATGCAAGAGGTAGAGCTAATCTTGGATATACAAGGTTAGATGCCAAGAACTATCTCCAAGCAAAAAGACAACATAGCATGGTTTATGGGGAAGCCGGTAGCCTCTTGGAGTATTTTCAACACCAATTGCTAGAGAATCCATCATTTTACCATGCCTATCAGATGGATCTTGAGgaaaaaatgacaaatctATTTTA 644 0.337 MESLEVNWKPSIGMEFDNVEAAWQFWVEYGKKNGFGVRQQYKNKNVDGSIRSYRFVCCKEGHQEVDKRLVKKPTKETRTGCKSRIALSLKNGKFVIHEFVEAHNHLLQLLETTHMLASHRKISKAQAYEIEMAKNSGLVQNDSFQLMSTYARGRANLGYTRLDAKNYLQAKRQHSMVYGEAGSLLEYFQHQLLENPSFYHAYQMDLEEKMTNLF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00247 214 Pfam FAR1 DNA-binding domain 24 107 IPR004330 -
Bva01g00247 214 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 5 214 IPR031052 GO:0006355
Bva01g00247 214 PANTHER OS03G0181600 PROTEIN 5 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00247 Bva-Chr1 1983903 1984547 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva01g00247 FAR1 8.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00247 - - cam:101507947 287.345