Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00214 ATGCCAACATTTGTGCAAACCCCAATCCAGCAAGACAACTCCTTCGGgttgtttaatgttttttcaTTGGCTATCTTATCCATCTTCCTCTTTATTGTATTCAAATGGTATTCAAGTTATAGAGGCTCCACAGGCTTACCCCCTTCTCCTCCAAAATTCCCAATAATTGGAAACCTCCATCAACTTGGCTTGTATCCTCATCGTACACTCGCAACCATAGCTCAAACGTATGGCTCcttaattttgattcatttggGGAGTGTCCCAGTTCTTGTGGTCTCCTCTGCAGAAGATGCTAGTGAAGTAATGAAAACTCATGACCTTGTCTTCGCTAACTGCCCACGAAGGAAGATGTTTGATATACTCTTGTATGGCTCCAAAGATGTAGCAACTGCACAATATGGTGAGTATTGGAGGCAGATAAGAAGCATCTCTGTCTTACATCTTCTTTGTAGCAAAAGGGTTCAATCTTTTCGTGTTGTGAGAGAGGAGGAAACCGCGATAATGATGCAAAAGATTAAGCAATCTTCTTCTTTGGTGAATTTAAGTGAGATACTCTCAAATCTTACAAACAATATAGTTTGCAGGGTGGCTTTGGGAAAGAAATATAGTGAAGGAGAAGATGGGAGGAAGTTTCATGAGCTGTTGAGGGAGTTTGTAGAACTATTGGGTACTTTTGTTATTGGGGACTATATACCTTGGCTTGATTGGTTGAGCCAAGCTAGTGGCATATATGGCAGAGCAGAGAGAGTAGCCAAAGAGTTCGATAGGTTTCTGGATCAAGTTGTTGAAGAGCATATTAAAAGAGGAGTTAGAGATGTTGATAATGAAGAACAGAATGATTTTGTTGATGTTTTGCTTTGGATCCAAAAGAGCAACGCCATTGGCTTCCCTATTGATTCAACAGTCATAAAGGCTTTGATCCTGGATATGTTTGCGGCAGGTACTGACACAACATACACGGTCATAGAATGGGCAATGGCAGAACTCCTAAGGCACCCAACTGTAATGAAGAAACTGCAACATGAAGTGAGGAATGTGGCTGGTGTTAGAATACACATAACTGAGGAGGATTTGAGTCAGCTACACTACTTAAAAGCTGTGCTTAAAGAAACACTTCGCTTACATGTCCCAATTCCATTATTACTTCCTAGACAAAGCATGCAAGATATCAAGTTAAAAGGGTACCACATTGCAAGTGGCACTCAAATAATTGTAAATGCTTCGGCAATAGCAAGAGATCCTATGTATTGGGATCAACCGGAAGAGTTTCAACCGGAGAGGTTCTTGAATAGTTCTATAGATTTTAAAGGGCATGATTTCCAATTGATACCATTTGGAGCGGGAAGAAGAGGGTGTCCGGGATCATTGTTTGCCATGGCCGTTAATGAGATTGTTCTAGCAAACCTTGTCCTTCAGTTCTATTGGACATTGCCAAGTGGATCAACTCTGGACATGTCGGAAACTACTGGATTGACAATACACAAAAGTTTTCCTCTTGTGGCTGTTGCATCCTCATACATGAATAACTAAATAAGTGCATTTATGTAGGAAGCTATAGGCTCTTTTTCATTCCCAAAAATGTATGCGCTTCTATTAAGGTGTCTTAAATAACCAGTAAAGGAGTCGAAAGGTGTAGGTTGCTCTAGTGAATTAGTTTTGGGTTACATTTACTCAGGTCAAAATACTTTGATTTGCTTGCTTCAAATATCATCCAGT 1719 0.3967 MPTFVQTPIQQDNSFGLFNVFSLAILSIFLFIVFKWYSSYRGSTGLPPSPPKFPIIGNLHQLGLYPHRTLATIAQTYGSLILIHLGSVPVLVVSSAEDASEVMKTHDLVFANCPRRKMFDILLYGSKDVATAQYGEYWRQIRSISVLHLLCSKRVQSFRVVREEETAIMMQKIKQSSSLVNLSEILSNLTNNIVCRVALGKKYSEGEDGRKFHELLREFVELLGTFVIGDYIPWLDWLSQASGIYGRAERVAKEFDRFLDQVVEEHIKRGVRDVDNEEQNDFVDVLLWIQKSNAIGFPIDSTVIKALILDMFAAGTDTTYTVIEWAMAELLRHPTVMKKLQHEVRNVAGVRIHITEEDLSQLHYLKAVLKETLRLHVPIPLLLPRQSMQDIKLKGYHIASGTQIIVNASAIARDPMYWDQPEEFQPERFLNSSIDFKGHDFQLIPFGAGRRGCPGSLFAMAVNEIVLANLVLQFYWTLPSGSTLDMSETTGLTIHKSFPLVAVASSYMNNISAFMEAIGSFSFPKMYALLLRCLKPVKESKGVGCSSELVLGYIYSGQNTLICLLQISS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00214 569 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 Gene3D Cytochrome P450 34 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 SUPERFAMILY Cytochrome P450 47 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Bva01g00214 569 PANTHER CYTOCHROME P450 FAMILY PROTEIN 23 506 - -
Bva01g00214 569 Pfam Cytochrome P450 47 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PANTHER CYTOCHROME P450 71B11-RELATED 23 506 - -
Bva01g00214 569 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00214 569 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00214 Bva-Chr1 1738796 1741525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00214 48 506 Cytochrome P450 AT3G48270 51.724 4.13e-176 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00214 - - gmx:100819183 633.254