Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00193 ATGCAGATGGAGAGACAGCAATGGCAATCATGGAGGATCAACGTTCATGCCAAGAACTTCAGCTTCAAACTAAGAGCAGCAAGAAGTTTGGTCCCCAGTTGCAACTTCTGCAGGTTCTCTTTGGCACTTAAGCTTCGAAAATTCGTCTTCAAACTAGATTCAGATCCCATAACCCCAATTCCTCAGTATAAAACATCTCTGAAAACCAGAGTGGTCAAATTTTTCAAGAGATTTTCCCGGAAATTTCGACCCCAAATTGGCAAGAATCGACCCATTATTCAACAACCTAAGGATCCAATTGGCATTGGCTTGTGGGTTGGGGGATTTTTGGCATTTCTATCTCAATTTGTGTTCAAAAGAGATGAAAAGGGGATCATGATTCTTACCTTCGTGGGTTTTCTTGTTGCATTGTTGTTCAAGAAATATGAGAGAGGTAAATATATGATGATTATTATGGCAGTTGTTCTGGTTCTGATGGCAGTCTTGGTGGCTTGTTTCAAGTTTTTGGATTTGGGtttggaaaattattgctGGAATTTCATGGGAAAGTTTGCATTAGAACAAGCTAAAGAGGCATGGAATAGATTCAATAGAGGGTTTTTCTTCATCGAATCTAAACCACAGGTTACAATTCCGCCATTTCGCTTCTCGCAATTGCTTCTGACTCAATTGCATGAGCTGCTATCTTACAGaTATACAGTTCTAAAGCAGCCAGGCTTTTTAAACAGGATGGGGTGTTTCGCTGTCTTGAAGggtaagaagaaaaagtctGAACAGATCATGTACATAAAACGTGTCAACCATAAGGAGCATGTGCCTACAGTGCTTCCTGAACCTCAAACTCATACTCGTTCATTGACTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCAATAACAAAGTTTCTAACAGTAGAACACGAGCATTGTCTGCACCATCGAGTCTAGATGCAGCAGAACAAGAAGCATTGGTATCAATTGAATATGAAGAACAGGAAGAGTCAAAATACCGAACTGGATCAGTGAAGGAGCAGCGCTCATCAAGTCCACAACCTTTACCTCTCCCATCTCCTCAGGGGGGTTCTGCATTGAAGGCTATTGGAAGCTTTAAGTCAGTGACAGCTAGTGGTCCTCTAAATGCTTCTGGACCTTTGCCATTGCCACCTACTGGGACACTTCGAAACTTTCTATTTGAGGATATTGTTGCTGCTTGCAACTATTTCTCTTCAGATCGATGCATGTCTGAAGGTCTTTCTTCCACCATGTATAAAGCTTCCTTTGGTGATGATacttcaaattcaaagaaatttgaagcaaCAGTCACTCGTCTGCACCCATCAACTCAGGGTTTGAAGGAGTTTATTAGTGAGGTTAGTACTATTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTTGGTTTTCATGCACGGGAGGGTTCAGAACAGAGAATGCTAATTTATGAGAGATTATACCATGGAAGCCTGGACCGCCTATTGTATGGAAGATCTGATGGCCCGCCAATTGATTGGAATACAAGAATGAAAATTGCTTTATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTACAATGAATTTTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGCGTTGGACACATTCCTGAGGCAGAGATCTCAACCAATTCAGTTgCTGTGGCAAATTTATCAATGGAGACACTGGAAAAAGGACTGCTGACACCAAAGAGCAATGTCTGGAGTTTtggcatttttcttcttgaactGCTTACCGGAAGAAAGAATCTCGATAGCCGTCACCCTAAGGAGGAGAGGAATTTAGTGAAGTGGAGCCGGCCTTTCCTATCGGATGATTGTCGGCTGTCATTGATCATGGATCCCCAGCTTAAAGGTCGCTTTCCTTCCAAAGCAGCAAGGACCATAGCTGACATTGCACAAAGATGCCTTCAAAAAGAGCCATTAGAAAGACCCACCATGAGAACTGTTGTTGAGCATCTCAAAATGATACAGGATGTGAAGTATTCCTGCCGGTTTCCTCTACAAGAGCCAGCAGCGATATCTGGAAAACAGATGTCTAGGTCACCAAGTCTTAATGGCATGATCACTCCTGCGCCTAGACTGAATTTCTCTCCCTCACCGCCACCGGGGGCGGCCCGGCCATCTATTTCACCTCCAAGATGGTCTGGTGTGCCCAGCTCTCTTCCTCCTTGGGCTTGTTCCTCTACCGTCTTGCCGGAGGAACTTGATCGACAAGAAAGCCGGAAGTCATCATCTTCAACCTACAGGAGGGCTAGTGTAGAAGGATTTTG 2369 0.423 MQMERQQWQSWRINVHAKNFSFKLRAARSLVPSCNFCRFSLALKLRKFVFKLDSDPITPIPQYKTSLKTRVVKFFKRFSRKFRPQIGKNRPIIQQPKDPIGIGLWVGGFLAFLSQFVFKRDEKGIMILTFVGFLVALLFKKYERGKYMMIIMAVVLVLMAVLVACFKFLDLGLENYCWNFMGKFALEQAKEAWNRFNRGFFFIESKPQVTIPPFRFSQLLLTQLHELLSYRYTVLKQPGFLNRMGCFAVLKGKKKKSEQIMYIKRVNHKEHVPTVLPEPQTHTRSLTAPPSFRTRVKPIQPNNKVSNSRTRALSAPSSLDAAEQEALVSIEYEEQEESKYRTGSVKEQRSSSPQPLPLPSPQGGSALKAIGSFKSVTASGPLNASGPLPLPPTGTLRNFLFEDIVAACNYFSSDRCMSEGLSSTMYKASFGDDTSNSKKFEATVTRLHPSTQGLKEFISEVSTIASLQHPNLCKLLGFHAREGSEQRMLIYERLYHGSLDRLLYGRSDGPPIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEAEISTNSVAVANLSMETLEKGLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDDCRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPLERPTMRTVVEHLKMIQDVKYSCRFPLQEPAAISGKQMSRSPSLNGMITPAPRLNFSPSPPPGAARPSISPPRWSGVPSSLPPWACSSTVLPEELDRQESRKSSSSTYRRASVEGF 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00193 789 MobiDBLite consensus disorder prediction 278 317 - -
Bva01g00193 789 Gene3D Phosphorylase Kinase; domain 1 392 492 - -
Bva01g00193 789 Gene3D Transferase(Phosphotransferase) domain 1 494 698 - -
Bva01g00193 789 Pfam Protein tyrosine and serine/threonine kinase 417 686 IPR001245 GO:0004672|GO:0006468
Bva01g00193 789 PANTHER OS01G0822200 PROTEIN 286 788 - -
Bva01g00193 789 PANTHER OS01G0588500 PROTEIN-RELATED 286 788 - -
Bva01g00193 789 MobiDBLite consensus disorder prediction 332 364 - -
Bva01g00193 789 SUPERFAMILY Protein kinase-like (PK-like) 389 697 IPR011009 -
Bva01g00193 789 MobiDBLite consensus disorder prediction 727 741 - -
Bva01g00193 789 ProSiteProfiles Protein kinase domain profile. 411 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00193 789 MobiDBLite consensus disorder prediction 726 789 - -
Bva01g00193 789 MobiDBLite consensus disorder prediction 272 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00193 Bva-Chr1 1577536 1585679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00193 386 692 Receptor kinase-like Gene Family AT4G02010 37.179 4.16e-54 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Bva01g00193 PK_Tyr_Ser-Thr 4.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00193 - - gmx:100809117 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00193 01 1577536 1585679 Bva02g00501 02 6373512 6377702 BWGD
Bva01g00193 01 1577536 1585679 Bva01g00193 01 1577536 1585679 ECH