Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00192 ATGCCTCTCCCTACTTGCTTGGCCATGATACTGACGTTAAAATCAAAGGTCAACAGTGACCGACCATGCAGTATAACAAGCAGAGACACAATCTCTGGGTTGGTGACTCATGCGATGCAACTCAATACGGCTAATATGCATCGTCGTCTGCTTGACAAGGAGCTGATCATGACACCTGAGGCAGCTGATGGAAACAAGACGAGTGATTCGTTCATAAGCGACCCCAACTTTGACACCAATATGGTGATCATTTTGGCAGCTCTATTGTGTGCATTAATATGTGCTCTTGGATTGAACTCAATTGTGCGCTGTGCTCTGAGCTGTAGACGTAGAATTTCCAGTGAGACACGACATCAAGTAGCTGCTAGGCTTTCTGCGAAGGGCCTAAAGAAACGAGATTTGAGTCAGATTCCGGTGATAGTGTACGGCTCCGGCGCAAATATTCCGGCAACGGAGTGCCCGATTTGTCTTGGTGAGTTCGAGAAGGGAGACAAGGTGCGAATGCTGCCAAAATGCAATCACGCGTTCCATGTGAGGTGCATAGACAGATGGCTCATGTCAAATTCTTCTTGCCCAACTTGTCGCCATTCTTTACTAGACAAATCAGCAAATTCGAATACAAATCAAGAGGTCGCCGGAGCGAGGCCACCGGAAAATGGGTCAGGCCGACAGGGCGGTTTTATTGTGGTGGTCGCCGGGCAAAGTTG 707 0.4837 MPLPTCLAMILTLKSKVNSDRPCSITSRDTISGLVTHAMQLNTANMHRRLLDKELIMTPEAADGNKTSDSFISDPNFDTNMVIILAALLCALICALGLNSIVRCALSCRRRISSETRHQVAARLSAKGLKKRDLSQIPVIVYGSGANIPATECPICLGEFEKGDKVRMLPKCNHAFHVRCIDRWLMSNSSCPTCRHSLLDKSANSNTNQEVAGARPPENGSGRQGGFIVVVAGQS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00192 235 MobiDBLite consensus disorder prediction 205 226 - -
Bva01g00192 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 200 IPR013083 -
Bva01g00192 235 Pfam Ring finger domain 152 195 IPR001841 -
Bva01g00192 235 SMART ring_2 153 194 IPR001841 -
Bva01g00192 235 PANTHER RING-H2 FINGER PROTEIN ATL74 46 230 - -
Bva01g00192 235 ProSiteProfiles Zinc finger RING-type profile. 153 195 IPR001841 -
Bva01g00192 235 SUPERFAMILY RING/U-box 136 201 - -
Bva01g00192 235 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 46 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00192 Bva-Chr1 1574063 1575498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00192 55 199 C3H Transcription Factor Family AT3G10910 59.236 8.77e-55 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00192 K19040 - tcc:18602224 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00192 01 1574063 1575498 Bva01g00192 01 1574063 1575498 ECH