Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00185 ATGAGTTACAGCGAAAGGAACAGAGCAGGAGAAGAGGGGGAATGTAAAGAATCGGTTTATTTGGAATCGAAATCAGTGATAAAAAATGGGTTGATAGCAAGCGAGCATCTAACAATTGATGAGAGTCTTTTGGTTGATCCGAAACATCTGTATATTGGGGCCAAAATTGGTGAGGGAGCTCATGGCAAAGTTTATGAAGGAAGGTATGGAGATCGAATTGTTGCAATTAAAGTTCTACATCGTGGGAACAACTCAGAAGAAAAAGCTTCCCTTGAAAATCGTTTTGCTCGGGAAGTTAATATGATGTCCCGCGTCCATCATGAGAATCTTGTTAAGTTTATTGGAGCTTGCAAGGATCCTCTGATGGTAATAGTTACAGAGCTGTTACCAGGGATGTCTCTTCGCAAATACTTACTCAGTTTACGGCCAAAGCTACTAGACCTTCATGTGGTCATAAACTTTGTCCTTGATATTGCTCGAGCCATGGAATGCCTCCATGCCAATGGGATCATACACCGAGACCTGAAACCTGACAATCTGTTGCTCACGGCAAATCAGAAGTCTGTTAAGCTTGCAGATTTTGGTCTTGCAAGAGAAGAATCCGTGACAGAAATGATGACTGCAGAAACCGGAACTTACCGCTGGATGGCACCTGAGTTATATAGTACTGTAACATTGCGCCAGGGAGAGAAGAAACACTACAACAACAAGGTGGATGTATACAGCTTTGGAATCGTCTTGTGGGAGCTCTTCACGAATCGCATGCCTTTTGAAGGGATGTCCAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTGTCCTTCCAGAAGATATATCCCCCGGTCTTGCCTTTATCATACAATCGTGCTGGGTTGAGGATCCGAATATGAGACCGAGCTTTAGTCTGATCATTCGAATGCTGAATGAATTCCTCTTCACGCTTGCACCACCCCCACCATCACCTCCCTTGTCGGAACCTGACAACAATGAGCAGAAACCAGCACCAGCGACTAGTGACAGTGCCATAACCGAGTTTTCTCCCCGGAACAAAGGGAAGTTTGCTTTTCTTCGCCATTTGTttgcttcaaagaggaccAAGAACTA 1115 0.4377 MSYSERNRAGEEGECKESVYLESKSVIKNGLIASEHLTIDESLLVDPKHLYIGAKIGEGAHGKVYEGRYGDRIVAIKVLHRGNNSEEKASLENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLLSLRPKLLDLHVVINFVLDIARAMECLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELFTNRMPFEGMSNLQAAYAAAFKQERPVLPEDISPGLAFIIQSCWVEDPNMRPSFSLIIRMLNEFLFTLAPPPPSPPLSEPDNNEQKPAPATSDSAITEFSPRNKGKFAFLRHLFASKRTKN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00185 371 ProSiteProfiles Protein kinase domain profile. 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00185 371 MobiDBLite consensus disorder prediction 322 350 - -
Bva01g00185 371 Gene3D Phosphorylase Kinase; domain 1 38 129 - -
Bva01g00185 371 SMART serkin_6 50 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00185 371 CDD STKc_MAP3K-like 56 311 - -
Bva01g00185 371 PANTHER SERINE-THREONINE PROTEIN KINASE 21 344 - -
Bva01g00185 371 ProSitePatterns Protein kinases ATP-binding region signature. 56 77 IPR017441 GO:0005524
Bva01g00185 371 PRINTS Tyrosine kinase catalytic domain signature 164 182 IPR001245 GO:0004672|GO:0006468
Bva01g00185 371 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Bva01g00185 371 PRINTS Tyrosine kinase catalytic domain signature 126 139 IPR001245 GO:0004672|GO:0006468
Bva01g00185 371 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Bva01g00185 371 SUPERFAMILY Protein kinase-like (PK-like) 41 333 IPR011009 -
Bva01g00185 371 Pfam Protein tyrosine and serine/threonine kinase 52 311 IPR001245 GO:0004672|GO:0006468
Bva01g00185 371 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 21 344 - -
Bva01g00185 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Bva01g00185 371 Gene3D Transferase(Phosphotransferase) domain 1 133 338 - -
Bva01g00185 371 MobiDBLite consensus disorder prediction 334 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00185 Bva-Chr1 1529902 1533140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00185 38 371 MAP Kinase Kinase Kinase AT5G01850 74.302 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva01g00185 PK_Tyr_Ser-Thr 4.7e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00185 - - csin:114261953 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00185 01 1529902 1533140 Bva02g00496 02 6340421 6343830 BWGD
Bva01g00185 01 1529902 1533140 Bva01g00185 01 1529902 1533140 ECH