Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00183 ATGTATGGTTCCAAAGCTCTACTGGGGTACGTTGAAACTGATCCATCTGGGCGCTATGGGCGTTTCAAGGATGTTCTGGGCAAAGGAGCCGTGAAGACAGTCTATAGAGCATTCGATGAGGTGCTTGGAATTGAAGTGGCTTGGAGCCAAGTAAAGCTAGGAGATGTGTTCCATTCACCAGACCAGTTGCAGCGCCTTTATTCAGAGGTTCATCTCCTCAAGAACCTTGATCATGACTCTATCATGACCTTCTATGCTTCTTGGATTGACGTCAACTGGAGAACCTTCAACTTCATCACTGAGTTGTTCACCTCTGGCACCCTCAGAGAGTATAGACAAAAATACCAGCGGGTAGATATCCGAGCAGTGAAGAACTGGGCTCAACAAGTTCTGCATGGTCTTGATTATTTGCACAGCCACGATCCTCCTGTCATACATAGAGATCTCAAGTGTGATAATATCTTTGTTAATGGCCATCTGGGGCAGGTCAAGATTGGTGATTTAGGCCTTGCAGCCATTCTTCGTAGCTCCCATCATGCTCATAGTGTCATAGGCACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGATTACAATGAGTTGGTGGACATATACTCGTTTGGAATGTGCATGATAGAGATGCTTACATCAGAGTTTCCTTATAGTGAGTGCTCGAACCCGGCTCAAATATACAAGAAAGTCACATCGGGAAAGCTGCCTAATGCATTTTACCGAATCGAAGATTTGGAAGCGCAAAGATTCGTGGGAAAATGTTTGGCAAATGTTTCAAAGAGATTGCCAGCCAAGGAGCTCTTGTTGGATCCATTTTTAGCTATCGATCAACTTGAGTTGCCATTGCCCACCCATCCTGAAAAGTCCAATTTTCCTGCTGCTGTTGCCAAGGAAAATCACCAAAAGAAGAGCACAAACATGACTATCACTGGGACATTGAATGAAGAAGATGACACAGTTTTCCTTAAAGTACAAATATCAGACAGAAAAGGGCATATAAGGAATATCTACTTCCCCTTCGACATTGTGAATGACACTGCTATTGCTGTGGCACTGGAGATGGTTAAAGAATTGGAAATCAGGGACTTGGAGCCATTTGAAATTGCTGAGAAGATTGAGGAGGAGATATTATCATTGGTTCCGACTTGGAAAGATTGGGGGAAATCGCAGTATAATCGGCAACACAATTTTAgctatgaagatgaagatgaagatgatatCACTGACCATCATGATCATCCTTTCGTCGTATCACTGCCATCTTCCCCTTCTTCCTCTCAGGGTTCTCTCCCAATCTCAGTGCACCAAAACCATACCACATTTGCTCAAGATTGGCTTCAAGATGAACCATTCATGAATGATGATGCAAGCTCTTCTAGCTCCATGAACTATGGGAATTTCAATTACAGCGACTCGGGGTGTGAAGATGGGTATGATCAAATAGGAGCTGCTGAACAGATTTGCTGCACCCAAAAGGCTACAAGATTCTGTCCTCAACGACAAGAGATTGAAGCTAATTTAGGCAAGAAATTCAGCATGCTAAGGATGAATTCTTGTCCGTGTGGCGGCAGCGTTGCTGGGTGCCAAAGGTTAAGGAGGATGCGTTCATATGTGGACGTGAGGAGACAGCAGCTGCAGCGGTCGTTAATGGAGGAGATACACAAGATAAGGATGTTCAAGACGGTTGGAGCCATTGAGAACATCGGCTTTCAACACCCAAATGGAAATTTTTCTCGTTG 1754 0.4356 MYGSKALLGYVETDPSGRYGRFKDVLGKGAVKTVYRAFDEVLGIEVAWSQVKLGDVFHSPDQLQRLYSEVHLLKNLDHDSIMTFYASWIDVNWRTFNFITELFTSGTLREYRQKYQRVDIRAVKNWAQQVLHGLDYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRSSHHAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCMIEMLTSEFPYSECSNPAQIYKKVTSGKLPNAFYRIEDLEAQRFVGKCLANVSKRLPAKELLLDPFLAIDQLELPLPTHPEKSNFPAAVAKENHQKKSTNMTITGTLNEEDDTVFLKVQISDRKGHIRNIYFPFDIVNDTAIAVALEMVKELEIRDLEPFEIAEKIEEEILSLVPTWKDWGKSQYNRQHNFSYEDEDEDDITDHHDHPFVVSLPSSPSSSQGSLPISVHQNHTTFAQDWLQDEPFMNDDASSSSSMNYGNFNYSDSGCEDGYDQIGAAEQICCTQKATRFCPQRQEIEANLGKKFSMLRMNSCPCGGSVAGCQRLRRMRSYVDVRRQQLQRSLMEEIHKIRMFKTVGAIENIGFQHPNGNFSR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00183 584 SUPERFAMILY Protein kinase-like (PK-like) 22 279 IPR011009 -
Bva01g00183 584 MobiDBLite consensus disorder prediction 423 437 - -
Bva01g00183 584 Pfam Protein kinase domain 23 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00183 584 Gene3D Phosphorylase Kinase; domain 1 8 101 - -
Bva01g00183 584 CDD STKc_WNK 18 278 - -
Bva01g00183 584 SMART serkin_6 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00183 584 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 578 - -
Bva01g00183 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Bva01g00183 584 Gene3D Transferase(Phosphotransferase) domain 1 103 282 - -
Bva01g00183 584 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK5-RELATED 4 578 - -
Bva01g00183 584 MobiDBLite consensus disorder prediction 405 437 - -
Bva01g00183 584 ProSiteProfiles Protein kinase domain profile. 20 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00183 Bva-Chr1 1490300 1494766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00183 8 475 MAP Kinase Kinase Kinase AT3G51630 62.292 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva01g00183 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00183 K08867 - gmx:100816187 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00183 01 1490300 1494766 Bva02g00493 02 6311704 6317054 BWGD
Bva01g00183 01 1490300 1494766 Bva01g00183 01 1490300 1494766 ECH