Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00181 atggGAAATTACAGATTCAGGTTTTCTGATATGATGCCCAATGCTTGGTTTTACAAGCTCAAAGAAATGGGcaaaaaaggcaaaaacaaAGCCAATAGAAAGAAGAAGCAGCAATCTTCATCAGcatcagcagcagcaacatcaACCAGAAAATCTTATTACTTCACCAGAGAGTTAAGCCCAAGTGATAGAATCTACACTTCACCAGCAGCaaacccaaaattttcttctgcaGAAACCATTTTCCTGGAACCACCCAGAAAATCATCCAAACAGAGACCCAAGAGAAAATCTCAGAGGTCTTCTAATTCTCCCAAGCTTGCCGTTAACTCCTCTGTTTCTGCTGGTTGTAGCTGCAGAACCACTGCAGATTctgtttggaccaaatcagATTCTCCACCCGAGTGTTCATCTTCTCCATTTGATGATAGCTCCCCTGAATCAGAATTCCCAGAACCAGATTTCAGAACAGACCGTGTTCTTGCCATTGAACCTTTTGATGAAACCGTTTTGTCGTCTCACCCTTGTGCCTGCAGGCTCAATCCCAATGCCCACGACGTCGTTTTCGATGTGGACAAAAGCTCCATAGCCAGAAAAGACGATAAACTTAATGGGTATGATTCCTTTTCAGTGCTTGAACTTCCTCCCATCATAACCAAACCTGCAAAATTCGATGAATTGCTAATCGCtgccaagaaaagagaaaaacccaGAAGCAGAATCGCAGGAAAAGAAGAATCCAATTTGCAGAAACCTCTGAAAGTTAAGACAGTGAAGGAAAACACGGGATCAATCGAAGAACAGACAGGTACCCGTGTTTCTCAAAGGAGATTCTCTGGGAGTTCTTCTCCAGGGGTTAAGCTTCGGATTCATTCTCCGAAGATTGGATTTGGAAGCAGAAAATTTCAGGGAAATGGCCGGAAAAGTGTGTCGTCTAGTTCTTCGAGCTCGAGGAGAAGCTTATTAGATAGCTTTGCCGTTGTGAAATCGTCTTTCAACCCTCAGAGAGATTTCAGAGAATCAATGGTGGAAATGATTGTGGAGAAAAACATAAGGGATTCAAAGGATTTGGAAGATCTTCTTGCTTGCTATCTTTCTCTGAATTCAGAAGAGTACCATGATCTCATTATCAAAGTGTTTAAGCAAGTCTGGTTCAATTTGACTGATATCcagaagaaata 1181 0.3819 MGNYRFRFSDMMPNAWFYKLKEMGKKGKNKANRKKKQQSSSASAAATSTRKSYYFTRELSPSDRIYTSPAANPKFSSAETIFLEPPRKSSKQRPKRKSQRSSNSPKLAVNSSVSAGCSCRTTADSVWTKSDSPPECSSSPFDDSSPESEFPEPDFRTDRVLAIEPFDETVLSSHPCACRLNPNAHDVVFDVDKSSIARKDDKLNGYDSFSVLELPPIITKPAKFDELLIAAKKREKPRSRIAGKEESNLQKPLKVKTVKENTGSIEEQTGTRVSQRRFSGSSSPGVKLRIHSPKIGFGSRKFQGNGRKSVSSSSSSSRRSLLDSFAVVKSSFNPQRDFRESMVEMIVEKNIRDSKDLEDLLACYLSLNSEEYHDLIIKVFKQVWFNLTDIQKK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00181 393 MobiDBLite consensus disorder prediction 124 145 - -
Bva01g00181 393 MobiDBLite consensus disorder prediction 76 110 - -
Bva01g00181 393 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 325 388 IPR006458 -
Bva01g00181 393 MobiDBLite consensus disorder prediction 36 50 - -
Bva01g00181 393 Pfam Transcriptional repressor, ovate 331 387 IPR006458 -
Bva01g00181 393 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 125 - -
Bva01g00181 393 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 133 390 - -
Bva01g00181 393 ProSiteProfiles OVATE domain profile. 327 386 IPR006458 -
Bva01g00181 393 MobiDBLite consensus disorder prediction 124 156 - -
Bva01g00181 393 MobiDBLite consensus disorder prediction 257 316 - -
Bva01g00181 393 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Bva01g00181 393 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 125 IPR038933 GO:0045892
Bva01g00181 393 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 133 390 IPR038933 GO:0045892
Bva01g00181 393 MobiDBLite consensus disorder prediction 257 286 - -
Bva01g00181 393 MobiDBLite consensus disorder prediction 26 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00181 Bva-Chr1 1472760 1473941 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Bva01g00181 Ovate 3.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00181 - - gmx:100794572 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00181 01 1472760 1473941 Bva01g00181 01 1472760 1473941 ECH