Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00175 ATGGAAGGACAAGGAAGCGTGCTGATGCAACGATATGAAATAGGGAGATTGTTGGGCCAAGGAACGTTTGCAAAAGTCTATCATGCTAGGAACCTTATGACTGGCATGAGTGTGGCCATTAAGGTAATCGACAAAGAGAAGGTTTTGAAAGTTGGGATGATTGATCAGATTAAGCGAGAAATTTCGGTGATGAGATTAGTCAGACATCCACACGTGATTGAGCTTTATGAGGTAATGGCCAGTAAAAGCAAGATTTACTTTGTCATGGAGTATGCAAAAGGTGGTGAGCTCTTCAACAAGGTAGCCAAAGGAAAGCTCAAGGAGGATCTTGCTAGGACATACTTTCAGCAATTGATCAGTGCTGTTGATTACTGCCACAGCCGAGGTGTTTTTCATCGCGACCTGAAGCCTGAAAATTTACTGTTGGACGAAAATGGGAATTTGAAGGTTTCAGATTTTGGATTGAGTGCTTTTGCTGAATCTAAGCGCCAAGATGGATTGCTCCATACTACATGTGGCACCCCTGCCTATGTTGCTCCTGAAGTAATAAACAGAAGGGGTTATGATGGGTGCAAAGCTGATATATGGTCGTGTGGGGTAATCTTGTTTGTTCTATTGGCTGGCTATCTTCCTTTCCATGACTCAAATCTGATGGAGTTGTACAGGAAGATTGGTAAAGCAGAATTCAAATTTCCTAACTGGTTTGCATCAGATGTACGTCGGATGTTGTCCAAAATCTTGGATCCTAACCCGAACACCAGGATTTCAATTTCCAGAATCATGGAAAGTTCATGGTTCAAAAAAGGGTTGGCAACCAAGCCTGTTGTCACTGAGActgaagagaaagaagtagCTCCTCTAGATGCCGATGGAATATTTAGAGCTTCTGACAATGGCAGTCCTGTTGCAGATTTGAAAGACTCAAAACAAGAAaaagaaagaggcGAGGTTTACATCCAACAACCTGCCTCCATGATCATCTCTAAGCTCGAAGCAATTGCCAAGCGTCTTCGTCTGaaagtgaagaagaaagatggaGGGCTCTTCAAGTTAGAAGCTTCCAAGGAAGGCAGGAAAGGGAAACTGGGCATTGATGCTGAGATTTTCGAGATCACCCCGCACTTCCATCTGGTGGAGTTGAAAAAGTCCAATGGAGATACATTGGAGTATCAGAAGCTTCTGAAACAAGACATCAGACCAGCACTCAGTGACATTGTTTGGACCTGGCAAGGAGAACAGCCTAAGCAATTCCAACAAGTATCGCAGCGTGCCAACGGGGAGCCACAACCTGctttata 1298 0.4222 MEGQGSVLMQRYEIGRLLGQGTFAKVYHARNLMTGMSVAIKVIDKEKVLKVGMIDQIKREISVMRLVRHPHVIELYEVMASKSKIYFVMEYAKGGELFNKVAKGKLKEDLARTYFQQLISAVDYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAFAESKRQDGLLHTTCGTPAYVAPEVINRRGYDGCKADIWSCGVILFVLLAGYLPFHDSNLMELYRKIGKAEFKFPNWFASDVRRMLSKILDPNPNTRISISRIMESSWFKKGLATKPVVTETEEKEVAPLDADGIFRASDNGSPVADLKDSKQEKERGEVYIQQPASMIISKLEAIAKRLRLKVKKKDGGLFKLEASKEGRKGKLGIDAEIFEITPHFHLVELKKSNGDTLEYQKLLKQDIRPALSDIVWTWQGEQPKQFQQVSQRANGEPQPAL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00175 432 SUPERFAMILY Protein kinase-like (PK-like) 8 280 IPR011009 -
Bva01g00175 432 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bva01g00175 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva01g00175 432 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 3 300 - -
Bva01g00175 432 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 281 419 - -
Bva01g00175 432 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00175 432 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00175 432 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00175 432 PANTHER - 281 419 - -
Bva01g00175 432 CDD CIPK_C 307 402 - -
Bva01g00175 432 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Bva01g00175 432 PANTHER - 3 300 - -
Bva01g00175 432 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Bva01g00175 432 Gene3D Kinase associated domain 1, KA1 286 408 - -
Bva01g00175 432 CDD STKc_SnRK3 11 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00175 Bva-Chr1 1418209 1420986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00175 1 413 CBL-interacting serine-threonine protein kinases AT5G58380 63.636 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva01g00175 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00175 K07198 - gmx:100815651 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00175 01 1418209 1420986 Bva01g00175 01 1418209 1420986 ECH