Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00170 ATGTCCTCTAATAGACATTTCTCTGTTCTTCTCCATTCCTTGGTGCTTGCAATACTTGCAACCACAGCTTTTTCATCAAACCTTTCCCCTAACTTCTACGATCACTCGTGCCCTAACGGTTTGAGCACCATCAAGAAAGTGGTTGAGGCAGCGGTGAAAAAAGAGCGACGAATGGCTGCTTCCCTATTGCGTCTTCACTTCCATGATTGCTTtgtaaatGGTTGTGATGGTTCAATTCTTTTGGATTCCACATCCACCATTGACAGCGAGAAGAATGCAAATCCTAACATCAATTCTGTTCGAGGGTTTGATGTGGTTGATAAGATAAAGCTGGACGTAGACAAAGCATGTGGAGGCCCTGTTGTTTCTTGTGCAGATATATTGGCTGTTGCAGCTAGAGACTCCGTGGTTACTTTAGGAGGACCTACATGGAAAGTAATGCTAGGCAGAAGAGACTCCACCACAGCAAGCCGTGCCACTGCAAACACAGAAATtccattatcattttttaaccTCCCTCAACTCATTAACAGTTTCAAGAGGAAAGGGCTAAACGAGAAAGACCTAGTGGTGCTATCTGGTGGCCACACCATTGGACTTTCACGTTGTGTTTCATTCAGGGACCATATCTACAATGACCCCAACATTGATCCCATTTTTGCCAAAGAGCTTAAACAAATTTGCCCTGGAAATGGAGGTGACTCCAACCTTGCTCCTTTGGATCCAACGGCTGCACGATTCGATGTAGCTTACTTCGCCAATTTGGTTAAAGAGAAAGGGCTTCTTCATTCTGATCAAGAACTCTTCAATGGTGGTTCTACTGATGCACTTGTTAAACAGTATAGTTATGATTCTAAAGCTTTCTTCAATGATTTTGGAGAATCTATGATTAAGATGGGAAATATAAAGCCTCTCACTGGGAGCCAGGGCCAGATTCGTTTGAACTGCAGGAAAGTGAACTA 962 0.4252 MSSNRHFSVLLHSLVLAILATTAFSSNLSPNFYDHSCPNGLSTIKKVVEAAVKKERRMAASLLRLHFHDCFVNGCDGSILLDSTSTIDSEKNANPNINSVRGFDVVDKIKLDVDKACGGPVVSCADILAVAARDSVVTLGGPTWKVMLGRRDSTTASRATANTEIPLSFFNLPQLINSFKRKGLNEKDLVVLSGGHTIGLSRCVSFRDHIYNDPNIDPIFAKELKQICPGNGGDSNLAPLDPTAARFDVAYFANLVKEKGLLHSDQELFNGGSTDALVKQYSYDSKAFFNDFGESMIKMGNIKPLTGSQGQIRLNCRKVN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00170 320 PANTHER PEROXIDASE 70-LIKE 8 319 - -
Bva01g00170 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Bva01g00170 320 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Bva01g00170 320 Gene3D Peroxidase, domain 2 166 299 - -
Bva01g00170 320 CDD secretory_peroxidase 27 319 IPR033905 GO:0004601|GO:0042744
Bva01g00170 320 Gene3D - 31 320 - -
Bva01g00170 320 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 SUPERFAMILY Heme-dependent peroxidases 27 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 Pfam Peroxidase 45 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 ProSiteProfiles Plant heme peroxidase family profile. 27 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva01g00170 320 PANTHER PEROXIDASE 72-RELATED 8 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00170 Bva-Chr1 1383251 1385457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00170 26 320 Peroxidase AT5G05340 59.732 2.50e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00170 K00430 - gmx:100790910 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00170 01 1383251 1385457 Bva02g00478 02 6216052 6218378 BWGD
Bva01g00170 01 1383251 1385457 Bva01g00170 01 1383251 1385457 ECH