Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00167 ATGTCTTCTAGGGATCGAAGAAAAGCAGCTCTACAGCACAAGTTACAGCAGCTTCGAGCTGCCTCAAATTCTAGCGCTGTTAACAGAGCCTCAATTATTGTTGATGCCTTGAAACATATACAGGAGTTGAAGAAAAAGCTTGAAGAACTAAACGCAGAGCAGGGAAACGCTGAATCTTCATCCTCACAATTGCCTATGGTAACCGTGGAAACCCTAGAAAGGGGTTTCCTCATTAATGTGTTTTTGGAAAGGAACTGCCCTGGTATGCTTGCTGCAATACTTGAAGCCTTTGAGGAGCTCGGTCTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGATGCTTTCCAGCTAGAAGCCGTGGGAGGAGAAAGTCAAGAGAACGAAAGCATAGATGCTCAAGTGGTGAAGCAAGCTGTTCTGCAAGCAATCAAGAACATTGAGTA 443 0.4447 MSSRDRRKAALQHKLQQLRAASNSSAVNRASIIVDALKHIQELKKKLEELNAEQGNAESSSSQLPMVTVETLERGFLINVFLERNCPGMLAAILEAFEELGLDVLDARVSCEDAFQLEAVGGESQENESIDAQVVKQAVLQAIKNIE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00167 147 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 146 - -
Bva01g00167 147 CDD ACT_UUR-ACR-like 87 143 - -
Bva01g00167 147 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 146 - -
Bva01g00167 147 ProSiteProfiles ACT domain profile. 78 147 IPR002912 -
Bva01g00167 147 Coils Coil 33 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00167 Bva-Chr1 1360103 1361565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00167 11 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 25.694 1.95e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00167 - - gmx:100499821 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00167 01 1360103 1361565 Bva12g01780 12 14654780 14658939 ECH
Bva01g00167 01 1360103 1361565 Bva12g01412 12 12369604 12371461 ECH
Bva01g00167 01 1360103 1361565 Bva01g00167 01 1360103 1361565 ECH