Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00135 ATGGGAGCCTGTTGCAGTCAAGATATCAGATGTACCGACAGCGAGATGGATGATAATGAGCGTCAAGAAGATAATGCTGTCTCATATGGAGAATTTGGAGCTCGTATAAGGTTAAGAGGATCCTCTAGGTTGGTATCAATGTATAGCCAACAGGGAAAAAAAGGAGTCAATCAAGATGCAATGACTGTTTGGGAGAACTTCactggagaagaaaaaatggtgTTTTGTGGTGTGTTTGATGGTCATGGTCCTCTTGGCCACAAGATTGGGTGGTATGCACGGGACACTTTACCCTCAAAACTGTCTCATACAATCAAAAAGTCTCAAGAAAAGGTCGAGAAGTACTATGATGTTGCAGGTAAGCTAGACTCTGATAGCAACGATGGAGATGACAGTAAGCAACACCAGATGTCCCTTGCTTCATGGGAGAGCAGCTTTCTCAAGTCCTTTAGTGAAACAGATGACAATATTTCTCGAGACATCAATATAGACAGCTATTGCAGTGGTTGCACTGCTGTTACTGTGATCAAACAGGGAGATCAGCTGATGGTTGGCAACTTGGGTGATTCTCGTGCAGTACTTTGCAGAAGAGGAAACAAAGGCCAACTTATTCCTATTCAGCTTACTGTCGACTTGAAACCAAACATTCCAAGCGAAGCttcaagaattcaaaattgtGAAGGAAGAGTTTTTGCAGCAGCAGAAGAACCAGAAGTGTACAGAATATGGATGCCTGATGAAGACTGCCCTGGACTGGCAATGTCAAGAGCCTTCGGTGATTTTTGCCTCAAAGACTATGGCCTCATCTCAGTTCCTGATGTCTTCTATAGAAAGCTAACCAAGCAGGATGAATTTGTGGTTTTGGCATCTGATGGGATATGGGATGTGCTAAGCAACACTGAAGTAATAAAGGTAGTTGCTTCAGCAACAAAGAGGTCCCTAGCTGCCAAAAAGTTAGTAAAGCATGCTGTTCGGGCATGGAGAAATAAATATCCTGCTGCTAAGGTTGATGATTGTGCAGTCATATGCTTGTTCCTGAAAGATGAACCTCATACAACAGATTCAAAGCCTGACAAGACTAAGAACCATAGACATGAAAAGAGAAACTGTTCTAATGGCTCTAAATACACTAACAATGGAAACTTTGGAAGTGGCAAGCCAGTGGAAGAATGGGAAGCAGCTCTTGGAGGAGGGTTTTCAAGAGCCAACGCTGTATCACAAATTCCGCAGCTCACCAGGGATATAAGCAGACGGAAATCATACCGATACCAGGAGGGGGTTCTGGTTCACTA 1292 0.4234 MGACCSQDIRCTDSEMDDNERQEDNAVSYGEFGARIRLRGSSRLVSMYSQQGKKGVNQDAMTVWENFTGEEKMVFCGVFDGHGPLGHKIGWYARDTLPSKLSHTIKKSQEKVEKYYDVAGKLDSDSNDGDDSKQHQMSLASWESSFLKSFSETDDNISRDINIDSYCSGCTAVTVIKQGDQLMVGNLGDSRAVLCRRGNKGQLIPIQLTVDLKPNIPSEASRIQNCEGRVFAAAEEPEVYRIWMPDEDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKLTKQDEFVVLASDGIWDVLSNTEVIKVVASATKRSLAAKKLVKHAVRAWRNKYPAAKVDDCAVICLFLKDEPHTTDSKPDKTKNHRHEKRNCSNGSKYTNNGNFGSGKPVEEWEAALGGGFSRANAVSQIPQLTRDISRRKSYRYQEGVLVH 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00135 430 CDD PP2Cc 43 346 IPR001932 -
Bva01g00135 430 SMART PP2C_4 34 344 IPR001932 -
Bva01g00135 430 MobiDBLite consensus disorder prediction 352 382 - -
Bva01g00135 430 MobiDBLite consensus disorder prediction 352 371 - -
Bva01g00135 430 ProSiteProfiles PPM-type phosphatase domain profile. 44 346 IPR001932 -
Bva01g00135 430 PANTHER ALPHABET, ISOFORM E-RELATED 1 398 - -
Bva01g00135 430 SUPERFAMILY PP2C-like 41 348 IPR036457 -
Bva01g00135 430 Gene3D - 39 349 IPR036457 -
Bva01g00135 430 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 398 - -
Bva01g00135 430 Pfam Protein phosphatase 2C 59 325 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00135 Bva-Chr1 1021552 1026609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00135 1 376 PP2C-type Phosphatase Gene Family AT5G01700 51.842 1.05e-127 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00135 - - gmx:100783603 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00135 01 1021552 1026609 Bva02g00437 02 5929770 5932409 BWGD
Bva01g00135 01 1021552 1026609 Bva01g00135 01 1021552 1026609 ECH