Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00122 ATGGCGGGAGAAGAAGCTCAGAACGGAAGGGATGACATGCAGATCGATCGCCCTGAACCACATCTCCCTGATGAATTCAACCCAAATTATCTCAAAGTATATTATGggAAGCTATTTCCTTATGGTGATATGTTTAGATGGATGTCATATGGCAACGATGGCAAGCATCCTGGTTGTGATTCATCCTACTTTAGCCGGAGAGAATTTGCATACACAACTGGGGAAGATACATTTTGGCGGTACCAATCTTTTGACAGCGAAGCTCAATTTGAAAAATCCATCAAACAAAATTGCCCTTTTAAGATAGATATTGGACCTGTCTACACTGTGGAACCTGCGAAAAGAAATGCCTATGCACAAGGTGATGGTAATAATGTTTTCACTCCAGTTGAGAGGGAGCTAATATTTGATATAgaTATTAGTGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGCTTGGCCTGCTGGCCATTAATGACTATAGCTATCAAAGTGATCGATTGCTCATTGAGAGATGACTTTGGTTTTAAACACATTCTCTGGGCGTATAGTGGCCGGCGTGGTGTTCATTGTTGGGTTTGTGATAGCAGTGCAAGAAGGTTGACTAATGAGCAGAGAGCGGCTATTGCTGACTATTTTCATGTCTACACGGGCAATGAAAACAGTCAAAAGAAGGTCTCTTTGACGGGCTTTGCTCTTCACCCATTCCTGGTGAGATCATACAATGAAGTcctaaagaatttttttgagaCAAAGCTGCTTATTAGTCAGAACATACTTTCATGTGAAGAGAGATATGAAAAGATCCTAGATATGATTCCTgattcatCTGTTACTTCTGAACTTAGGGGCAAGTGGCAGGACAAAAGGCGGTCATCTAACACAAAAGAAGACATTAATATTGTTCGATGGGAACAACTTAAGCAGTTGCTGCAATCAGGAAGACAAAGGGCGCAAGGGCTGCGTAGGTGTGTTGAAGAGATTGTGTTCTCCTTTACTTACCCTAGGCTTGATATGGCGGTTTCAAAGAGTATGAATCACTTGCTGAAAGCACCATTCTGTGTGCATCCAAAAACAGGTCGCATCTGTGTCCCTATTGATCCAAAACGATGTGAGGAGTTTGATCCTACTGCAGTACCAACTCTTTCACAGGTTTTAGATGAACTTAACCAAGAGGGTTCGAGAGCTGATGCCAATCTTGAATTGAGTCGTACTTCGCTTGGAAATGCCATCAGAGTTTTCAGATCTTCTTTCTTAGAGCCTTTACTAAAAGCTTGCAAGGAGGAGATAGAAAGTTCCTTCTCTGCAAAATTGCAGAACTCAAGGGATTCCCTTAATTGGTA 1355 0.4096 MAGEEAQNGRDDMQIDRPEPHLPDEFNPNYLKVYYGKLFPYGDMFRWMSYGNDGKHPGCDSSYFSRREFAYTTGEDTFWRYQSFDSEAQFEKSIKQNCPFKIDIGPVYTVEPAKRNAYAQGDGNNVFTPVERELIFDIDISDYDDVRYCCSGADVCLACWPLMTIAIKVIDCSLRDDFGFKHILWAYSGRRGVHCWVCDSSARRLTNEQRAAIADYFHVYTGNENSQKKVSLTGFALHPFLVRSYNEVLKNFFETKLLISQNILSCEERYEKILDMIPDSSVTSELRGKWQDKRRSSNTKEDINIVRWEQLKQLLQSGRQRAQGLRRCVEEIVFSFTYPRLDMAVSKSMNHLLKAPFCVHPKTGRICVPIDPKRCEEFDPTAVPTLSQVLDELNQEGSRADANLELSRTSLGNAIRVFRSSFLEPLLKACKEEIESSFSAKLQNSRDSLNW 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00122 451 Pfam DNA primase small subunit 136 371 IPR002755 GO:0003896|GO:0006269
Bva01g00122 451 CDD AE_Prim_S 55 380 IPR014052 GO:0003896|GO:0006269
Bva01g00122 451 PANTHER DNA PRIMASE 37 451 - -
Bva01g00122 451 MobiDBLite consensus disorder prediction 1 21 - -
Bva01g00122 451 PANTHER DNA PRIMASE SMALL SUBUNIT 37 451 IPR014052 GO:0003896|GO:0006269
Bva01g00122 451 Gene3D DNA primase, PRIM domain 20 432 - -
Bva01g00122 451 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 32 391 IPR014052 GO:0003896|GO:0006269
Bva01g00122 451 SUPERFAMILY Prim-pol domain 26 394 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00122 1 451 Core DNA Replication Machinery Family AT5G41880 63.274 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00122 K02684 - pop:7465480 709.138