Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00121 ATGAACATCACCGGCATCTCGGAGCCTCGTGTCGTCGGGGTCTCCCTCTCCGGCGAGAACCTTCGGGGCTACATCCCGTCCGAACTCGGTAGCTTGGTCTATCTCCGGCGACTCAACATCCAcagcaataatttttatggttttctCCCCGTTCAGCTCTTCAATGCCACTTCTCTCCACAGCATGTTCCTCTATGGTAACAACCTCTCCGGTCCTCTTCCTCCTTCGATCTGCAACCTTCCGAGACTCCAAAACCTCGATCTCTCCAACAATTCCCTCTCCGGTTCCATCCCGGAGAACCTCAAGAATTGCAAGCAATTACAACGGCTAATTCTCGCTGGGAACAAGTTCTCCGGCGAGATTCCCAAAGCGGTGTGGTCGGAATTGGAGAATTTGGTCCAACTTGACCTATCAGCAAACGAGTTACAAGGTTCAATCCCAGAGGGTATCGGCGAATTGAAGGTTCTCTCCGGTACCTTGAATTTATCTTTCAACCATTTATCCGACCATATCCCAAAATCGCTAGGAAATTTGCCGGTAACAGTGAGCTTTGATCTCCGGAACAACAATCTTAGTGGGGAGATACCTCAAACGGGGTCGTTTTCAAACCAAGGCCCAACTGCATTTCTTAACAATCCTCAACTATGCGGGTTTCCTCTACAGAAATCATGCCGGGATTCCTCACCGGAGAGTTCAAATTCGAGCTCATCGCGGGAATCCGACAGCGGCTCCGCCACAAGCAGACGGCTGAGCCCGggtttaattatacttatttcAGTAGCTGATGCAGTAGGGGTTGCATTCATTGGGCTTGTGTTGGTTTACATTTATTGGAAGAAGAAGGATGATTCAAACGGTTGTAGCTGTACAGGGAAGAGAAAATTGGGAGGCGGAGGAGACAATGAAAAATCCCATGCTTGTTCATTTCCGTGTATGAACTTCAATGGTGCAAAGAGCGATGATTCTGAAGTGGACGATGATGCTGAGAAATCGCAAGCAGGAAGAGGAGAAGGGGAATTGGTGGCCATTGATAAGGGTTTTAGTTTCGATCTTGATGAGTTATTGAGGGCTTCAGCTTATGTGTTGGGAAAAAGTGGATTAGGGATTGTGTATAAAGTGGTTTTGGGCAATGGTGTGCCTGTGGCGGTGAGGAGATTGGGTGAGGGTGGAGAACAGAGGTACAAAGAGTTTGCTGCTGAAGTTCAAGCTATTGGGAAAGTCAAGCATCCAAACATCGTCAAGTTGAGAGCTTATTATTGGGCCTCTGATGAAAAGCTTCTCATTAGTGATTTCATCAACAATGGCAATTTGGCTACTGCTCTCAGAGGTAGAAATGGTCAAGCATCTCCGAGCTTATCATGGTCAACGAGATTACGAATTGCAAAAGGAACAGCAAGGGGCTTAGCCTATCTCCACGAATGCAGCCCAAGAAAATTCGTCCATGGTGATATCAAACCCTCCAACATTCTCCTTGACAATGAATTCGAGCCCCACATTTCAGATTTCGGCCTTAACCGGCTGATAACGATCACCGGCAACAACCCCTCCACCGGCGGCTTCATGGGCGCAGCTCTTCCGTCCTTGAAATCATcacaaacagaaagaaaagatcacAATTACAGAGCACCGGAAGCTCGAGTCCCCGGTTGCAGACCGACACAAAAATGGGATGTGTATTCATTTGGAGTTGTTTTACTTGAAATGATTACTGGGAAATCTCCAGAATCATCTCCAACTACATCAACTTCTGTTGAAGTTCCAGATTTGGTGAGATGGGTGAGAAAAGGATTCGAACAAGAAAGCCCGTTATCGGAATTGGTAGATCCTTCTCTGCTTCAAGAAGTGAATGCCAAGAAAGCAGTGCTTGCTGCATTTCATGTTGCCTTAGCATGCACAGAGGGAGACCCAGAAGTGAGGCCTAGAATGAAAACTGTCTCTGAGAACCTAGAAAGGATCGCCACGTA 1964 0.4613 MNITGISEPRVVGVSLSGENLRGYIPSELGSLVYLRRLNIHSNNFYGFLPVQLFNATSLHSMFLYGNNLSGPLPPSICNLPRLQNLDLSNNSLSGSIPENLKNCKQLQRLILAGNKFSGEIPKAVWSELENLVQLDLSANELQGSIPEGIGELKVLSGTLNLSFNHLSDHIPKSLGNLPVTVSFDLRNNNLSGEIPQTGSFSNQGPTAFLNNPQLCGFPLQKSCRDSSPESSNSSSSRESDSGSATSRRLSPGLIILISVADAVGVAFIGLVLVYIYWKKKDDSNGCSCTGKRKLGGGGDNEKSHACSFPCMNFNGAKSDDSEVDDDAEKSQAGRGEGELVAIDKGFSFDLDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWASDEKLLISDFINNGNLATALRGRNGQASPSLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNEFEPHISDFGLNRLITITGNNPSTGGFMGAALPSLKSSQTERKDHNYRAPEARVPGCRPTQKWDVYSFGVVLLEMITGKSPESSPTTSTSVEVPDLVRWVRKGFEQESPLSELVDPSLLQEVNAKKAVLAAFHVALACTEGDPEVRPRMKTVSENLERIAT 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00121 654 ProSiteProfiles Protein kinase domain profile. 356 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00121 654 SMART serkin_6 360 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00121 654 Pfam Protein kinase domain 361 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00121 654 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 128 654 - -
Bva01g00121 654 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 128 654 - -
Bva01g00121 654 Gene3D Transferase(Phosphotransferase) domain 1 432 654 - -
Bva01g00121 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Bva01g00121 654 ProSiteProfiles Leucine-rich repeat profile. 82 105 IPR001611 GO:0005515
Bva01g00121 654 Gene3D Phosphorylase Kinase; domain 1 339 431 - -
Bva01g00121 654 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 82 - -
Bva01g00121 654 MobiDBLite consensus disorder prediction 224 247 - -
Bva01g00121 654 SUPERFAMILY L domain-like 9 221 - -
Bva01g00121 654 PRINTS Leucine-rich repeat signature 83 96 - -
Bva01g00121 654 PRINTS Leucine-rich repeat signature 129 142 - -
Bva01g00121 654 Pfam Leucine rich repeat 81 142 IPR001611 GO:0005515
Bva01g00121 654 Gene3D Ribonuclease Inhibitor 7 227 IPR032675 -
Bva01g00121 654 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 83 125 - -
Bva01g00121 654 CDD STKc_IRAK 362 652 - -
Bva01g00121 654 SUPERFAMILY Protein kinase-like (PK-like) 361 649 IPR011009 -
Bva01g00121 654 MobiDBLite consensus disorder prediction 222 247 - -
Bva01g00121 654 SMART LRR_typ_2 32 56 IPR003591 -
Bva01g00121 654 SMART LRR_typ_2 129 153 IPR003591 -
Bva01g00121 654 SMART LRR_typ_2 80 104 IPR003591 -
Bva01g00121 654 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 83 125 - -
Bva01g00121 654 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00121 Bva-Chr1 928916 932904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00121 1 652 Receptor kinase-like Gene Family AT1G67510 71.749 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva01g00121 Pkinase 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00121 - - mnt:21388927 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00121 01 928916 932904 Bva02g00418 02 5827410 5831781 BWGD