Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00116 ATGGCATCTTCATCTTTCAATGTTCCTAGAAGGAAATATGATGTCTTTATTAGCTTTCGAGGAGAAGATACTCGCCGTGATCCATCAACTGTACGCTATCAAAAAAGATGTTATGAGGATGCATTTACAAGGCATGAAAAATTTGGGCATAACTCATTCAAGATTGAACGTTGGAGAACTTCATTGAAGAAGGTTGCAAATTTATCTGGAATTGATTCCTCAAAGTTTGAGACTGATGCTGAGCTTGTTGAGAAGATTGTCGACTGTGTTcgggtaaaaatgaaaaacattatGCTCCAAAATGATTCAACCGAGCTGATTGGAAGTCATGAACGAATTAAAGAACTGGAATTATTGTTGTGCAAAAGGCTGCAAGATGTTGAGATCATAGGGATTTGGGGCATGGGTGGTATTGGTAAGACAACTATGGCTAGTCttctatttaagaaattatctCATGGATATGAAGGTTACTACATTTTGGAAAATGTAAGGAAACAATTGGGGAAATATGAAAAAACTGAGTTGAAGAATAagcttatttcaaaattattaggaGAAGATCTTGATATTACAATGCCAGTTGGTTTACCTGATCATAGTAGTCTTCATCCAACAATTGGTTTGAGAGATCTCCAAGACAAAGCTCTTATAACTATATCGTCTAATGGAGAGGTATCCATGCATGATTTGATTCAAGAAATGGCTAGACAAATTGTTCGTGAGGAGTCTCCTAATGACCCTGGCAAACGCCGTCACTTGTGGGATCaagatgaaatttataaagtatTGAAGAATAACTTGGGGACTGGAGTTATAGAAAGCATAAGCCTACAATCTTGGAGAGGCAAAGAAATTCAGTTAGATCCCAAAGCTTTCAAAAAGATGgttaatctaaaaatttttaaattccaGTGCCGCTATGGATTGCTCATGTCTGACAAGATTCATAATTCATTACCAAAGGAGCTAAACTACTTCAAATGGGAAGTGTATCCTTCGAATTCCCCTCCATCGAAAGTATGTTTGAAGATTCTTGTTGAAAATCACATGCGAGATAGTACTGTGGAAAGACTTTGGGATGAAAGTCAGGATCTTGGGAATTCAAAACAAATTGATCTTTTTGGTTCTAGAGATTTGGAAGAGCTCCCGGATAAGTCCATGGcctcaaaacataaaatttttgatcTCTCCTTTTGCTTTAGTTTGCATCTTGACCATCCTTCTACTTTATCAAATCATAATCTTCTTGAACTGATTTTATTCGCCTGCCAAGATCTGCAGAGAACCCATGTTTGGTTGAGTTTGTTACCACAGTTGAATTCATTATTGACTGTCGTCAAGAAATTCCACTTGCTAACTACCTTTGGCCTCTTAAATTCATTAAGGGTTTTGAACTTTAGCCAATCCAATGTGGTGAGCTGGCCAGAAAGCATCAAGCATCTTCGAAATCTGGAACAACTTTGTTTGCGTTGCTGCTCAAGACTTCGGTCTATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGTCAGTTATTGCATATCTCTTGAGAGTCTGTTcacttcaaatttctcaatggCTCATCTTCCAAATCTGAGATATCTTTATTTGCGTGGGTGCTCAAGACTTCGGTCTATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGTCAGTTACTGCATATCCCTTGAGACTCTgttcacttcaaatttttcaatGGCTCATTTTCCAAATCTGGAACATCTTTATTTGCGTGGTTGCTCAAGACTTCGGTCTATACCAGAGCTTCCACCTTCCATTAAAATCTTAGATGTCAGTTACTGCATATCCCTTGAGACTCTgttcacttcaaatttttcaatGGTTCATCTTCCAAATCTGAGATATCTTTGTTTGCTTGGGTGCTCAAGACTTCGGTCTATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGTTAGTTACTGCATATCCCTTGAGAATCTgttcacttcaaatttttcaatGGCTCATTTTCCAAATCTGGAATATCTTTATTTGCGTGGGTGCTCAAGACTTCGGTCCATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGTCAGTTACTGCATATCCCTTGAGACTCTgttcacttcaaatttttcaatGGCTCATTTTCCAAATCTGGAACATCTTTATTTGCGTGGTTGCTCAAGACTTCGGTCTATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGCCAGTTACTGCGCATCCCTTGAGACTCTgttcacttcaaatttttcaatGGCTCATCTTCCAAATCTGGAACATCTTTGTTTGGGTGGGTGCTCAAGACTTCGGTCAATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGTCAGTTACTGCACATCCCTTGAGACTCTGTTCACCTCAAATTTTTCAATGGCTCATTTTCCAAATCTGGAACATCTTTATTTGCGTGGTTGCTCAAGACTTCGGTCTATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGCCAGTTACTGCGCATCCCTTGAGACTCTgttcacttcaaatttttcaatGGCTCATCTTCCAAATCTGGAACATCTTTGTTTGGGTGGGTGCTCAAGACTTCGGTCAATACCAGAGCTTCCACCTTCCATTAGAATCTTAGATGTCAGTTACTGCACATCCCTTGAGACTCTGTTCACCTCAAATTTTTCAATGGCTCATCTTCCAAATCTGGAACATCTTTATTTGCTTGGGTGCTCTTCGGTCTATACCAGAGCCTCCATCTTCCCTTG 2810 0.3669 MASSSFNVPRRKYDVFISFRGEDTRRDPSTVRYQKRCYEDAFTRHEKFGHNSFKIERWRTSLKKVANLSGIDSSKFETDAELVEKIVDCVRVKMKNIMLQNDSTELIGSHERIKELELLLCKRLQDVEIIGIWGMGGIGKTTMASLLFKKLSHGYEGYYILENVRKQLGKYEKTELKNKLISKLLGEDLDITMPVGLPDHSSLHPTIGLRDLQDKALITISSNGEVSMHDLIQEMARQIVREESPNDPGKRRHLWDQDEIYKVLKNNLGTGVIESISLQSWRGKEIQLDPKAFKKMVNLKIFKFQCRYGLLMSDKIHNSLPKELNYFKWEVYPSNSPPSKVCLKILVENHMRDSTVERLWDESQDLGNSKQIDLFGSRDLEELPDKSMASKHKIFDLSFCFSLHLDHPSTLSNHNLLELILFACQDLQRTHVWLSLLPQLNSLLTVVKKFHLLTTFGLLNSLRVLNFSQSNVVSWPESIKHLRNLEQLCLRCCSRLRSIPELPPSIRILDVSYCISLESLFTSNFSMAHLPNLRYLYLRGCSRLRSIPELPPSIRILDVSYCISLETLFTSNFSMAHFPNLEHLYLRGCSRLRSIPELPPSIKILDVSYCISLETLFTSNFSMVHLPNLRYLCLLGCSRLRSIPELPPSIRILDVSYCISLENLFTSNFSMAHFPNLEYLYLRGCSRLRSIPELPPSIRILDVSYCISLETLFTSNFSMAHFPNLEHLYLRGCSRLRSIPELPPSIRILDASYCASLETLFTSNFSMAHLPNLEHLCLGGCSRLRSIPELPPSIRILDVSYCTSLETLFTSNFSMAHFPNLEHLYLRGCSRLRSIPELPPSIRILDASYCASLETLFTSNFSMAHLPNLEHLCLGGCSRLRSIPELPPSIRILDVSYCTSLETLFTSNFSMAHLPNLEHLYLLGCSSVYTRASIFP 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00116 936 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 203 499 - -
Bva01g00116 936 PRINTS Disease resistance protein signature 528 544 - -
Bva01g00116 936 PRINTS Disease resistance protein signature 129 144 - -
Bva01g00116 936 Pfam Leucine Rich Repeat 820 836 IPR001611 GO:0005515
Bva01g00116 936 Pfam Leucine Rich Repeat 724 740 IPR001611 GO:0005515
Bva01g00116 936 Pfam Leucine Rich Repeat 580 596 IPR001611 GO:0005515
Bva01g00116 936 Gene3D - 25 94 IPR035897 -
Bva01g00116 936 Gene3D Ribonuclease Inhibitor 650 744 IPR032675 -
Bva01g00116 936 Gene3D Ribonuclease Inhibitor 841 932 IPR032675 -
Bva01g00116 936 Gene3D Ribonuclease Inhibitor 553 649 IPR032675 -
Bva01g00116 936 Gene3D Ribonuclease Inhibitor 745 840 IPR032675 -
Bva01g00116 936 Gene3D Ribonuclease Inhibitor 447 552 IPR032675 -
Bva01g00116 936 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 203 499 IPR044974 GO:0006952
Bva01g00116 936 SUPERFAMILY L domain-like 228 637 - -
Bva01g00116 936 Gene3D - 95 202 IPR027417 -
Bva01g00116 936 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 194 IPR044974 GO:0006952
Bva01g00116 936 Pfam NB-ARC domain 124 265 IPR002182 GO:0043531
Bva01g00116 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 191 IPR027417 -
Bva01g00116 936 SUPERFAMILY L domain-like 544 927 - -
Bva01g00116 936 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 32 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00116 Bva-Chr1 896383 902321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00116 197 569 WRKY Transcription Factor Family AT4G12020 31.633 4.30e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00116 - - ahf:112783417 310.457