Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00095 ATGATGCAGCCTGAGATTCTTCAGGATTCATGGTCATTCTTTGAAGAAATGAGCTTAAATTTTGATCAAGTTGAAAACTTTAGCTTCAATTTTGATACCCAGGTGAGTGATTGTGATTTCAATTCTCTTTACAGTTCACCAGAGGAAACTCATGAACTTTCCAATATCCCCTCTTCATCTATCAGTTTCTCCGATGACTATGTCGAATACCCTTTTGATGATTGTGCCCAGCAACTCCCATCACTAATGGAGGATTTCTCCATGGATTTGGATAATGTTTTTGATTCTATTTTGAGTGCCCAGATTGCGAGTATTCATGGATATCCTGAAGAAAGTGAGGGAAGCTTTAATTCCCAACAACTCTCTTCTGAGGTTGAAGATCCATGGAGTCCAATAACATCCATGAAATCAGACTTGTCCACAGTTCACCCATCACTGACCTTGCCACATGAAGACATGGAAATTGACAACCAATTGAGCATTCCACACCTATTGGAGGCCCTTGCAGAAGCCACAGAACAGGGACAGAAGACTCTAGCAGAAGTAATTTTGAGATGCTTTAGCCAGAAAGTTAGCCCACTTGATAAAACTCTGGAGCGTATTGCATTCTACTTGTCCCAAGACATAACGTGTAGTTCTCAGGgagattttatcaaaaaggAGGCGTGCAAGAACTTTGACCCAGCTTTTAAGGTAATCTACCAGTGTTTCCCGCATGGGAAATTTGCTCACTTTACAGCAAATTCAGCAATCCTTGAAGCTATACCAGAGGATTCAGATGCAATACACATAGTGGACTTTGACATGGGAGAGGGGGTTCAGTGGGCTCCATTAATGGAGGCCATTgcacaacaacaacaacacaGAACATTGAAACTTACATCAATCAAATGGGAAGATGAGAGCCCTGAATGTGTTTTCACTCGAAGGCAGCTCTATGCACATGCCAAATCCTGTGGTCTAAGGCTAAAGTTAGAGGAAAAAGGAATTGAGAATTTGGTTATGGAGCTGAAAAAGTTgaacaaaagagaaggaaatggaAAGAGGGAATTTTTAGCCTTTAATTGCATGATGGGTCTTCCTCATATGGGGAGGACAAGGAGCAGAAGCCATGCCATGGAGTTTCTAAAGCTGGCTAAGGATGTGATTGGCAGCCACGGAAGCAAAGGAATTATCACTTTCGGCGATGGAGATACCTATGAGAAACTCAGGAATTGCTTGAATTTCAAATCATTCTTTGAGGGAAATTTAATGCATTACCATGCTTTATTAGAATCAATTGAAGCAAATTTCCCAAAGAAATTCTCTGAAGCGCGAATCGCCATggaatctctctttgtggcaCCTTATGTGTCTGCTCTTGCCTGGTTCAAGAAATGGGAGGAGGTCAGAGAAAATTGCCATCTCCATGGAGGGATTGGGTTAGAGAATAGAAGATTTGGCAAAGAAATTGTGATGGAAGTTAGAGAAATGTTGAAGGGAAGTGTAAGTTCATACCAGGCCAGGCTTGAAGGAAATGATGGTAATGAACTTGTTTTGGAATGGAAAGGCACAGAATTAGTGAGAGTTTCAACTTGGGGAATTTA 1586 0.3934 MMQPEILQDSWSFFEEMSLNFDQVENFSFNFDTQVSDCDFNSLYSSPEETHELSNIPSSSISFSDDYVEYPFDDCAQQLPSLMEDFSMDLDNVFDSILSAQIASIHGYPEESEGSFNSQQLSSEVEDPWSPITSMKSDLSTVHPSLTLPHEDMEIDNQLSIPHLLEALAEATEQGQKTLAEVILRCFSQKVSPLDKTLERIAFYLSQDITCSSQGDFIKKEACKNFDPAFKVIYQCFPHGKFAHFTANSAILEAIPEDSDAIHIVDFDMGEGVQWAPLMEAIAQQQQHRTLKLTSIKWEDESPECVFTRRQLYAHAKSCGLRLKLEEKGIENLVMELKKLNKREGNGKREFLAFNCMMGLPHMGRTRSRSHAMEFLKLAKDVIGSHGSKGIITFGDGDTYEKLRNCLNFKSFFEGNLMHYHALLESIEANFPKKFSEARIAMESLFVAPYVSALAWFKKWEEVRENCHLHGGIGLENRRFGKEIVMEVREMLKGSVSSYQARLEGNDGNELVLEWKGTELVRVSTWGI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00095 528 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 527 - -
Bva01g00095 528 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 527 IPR005202 -
Bva01g00095 528 Pfam GRAS domain family 163 526 IPR005202 -
Bva01g00095 528 ProSiteProfiles GRAS family profile. 152 527 IPR005202 -
Bva01g00095 528 Coils Coil 323 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00095 Bva-Chr1 769280 770964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00095 162 526 GRAS Transcription Factor Family AT5G66770 25.888 3.52e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva01g00095 GRAS 7.8e-46 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00095 - - gmx:100784347 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00095 01 769280 770964 Bva01g00095 01 769280 770964 ECH