Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00090 ATGGAGAAGATGGAAGGAAGCCAAGGTTCTGATGAGTGCTCGAAAACAAGCCCTTCAAACCGCGAAGAAGACGGGTACGAGAGCGAGGAGAATGAAGATGAAAGCAAGCCAAATAACAATGGAGGAAGCTCAAGTAACAGCACAGTGGATGTGAGCAGTGAGAAAAAGCCTTCTGTGAGACCTTATGCTAGATCCAAGTTGCCAAGGCTGCGGTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTATTCAAAGACTTGGAGGCCAAGAGAGAGCTACACCAAAGCTGGTTCTTCAATTGATGAATATCAAAGGGTTAAGTATTGCACATGTCAAGAGTCATTTACAGATGTATAGGAGCAAGAAGGTAGATGACCCAAACCAAGTATTGGCTGACCATAGGCATCTTGTGAATAGTGGAGACAGAAAAATTTACAACGTTAGCCAACTACCAATGCTTCAAGGATACAATCCAAGCCAAAATCCAACCTTGAGATATGGTCCATATGGATATGGGGTCGCTCCTATGGGTGTCCAAGAAAAATTGGTGCATAGACCTTTCATAGAAAGGATTTCAATGGATGAATTTGGAGCTGGATTTTATGGAAAAATGACAGAGAAAATCTTTGGAACCAATGGTAATTATATCAATTGGAATACTTCCAATGTTGGTGAGcaatcaagaaataaaatccaTGAACCAAGGGATGATCATCAATTCCTCTCGTTTGTTGCCCATGAATCACCATGCACACAGGGTGGATTTTTGAGTCAGATTGATCATAATCCTTTAACACATCAACAGCCAAAAGTTCAAGAGCTAATGCTTATCAATGAATCCACCACACCTACCGGTATCGAAAATACAGCAACAAATCCACAAGAgctgaagaaattgaaaaggaaggCCTCAGATATTGACCTTGATTTGGATTTGTCTCTCAAGTTAAGTTCAAGGAATGTTGAGAAGATGAGAAGTCAAGAAGAGGACCATGAAGTTGATAGTAATCTATCACTCTCTTTGTACTCTCAATCTTCATCTTCTAATAATTATCTTAGCAGTAGGTTGAAGGAAGGAAATGATAGTTGGAATAAGGAGCAAGGGAAAAGGGTGATTACTCTGGATCTGACTATATG 1139 0.3924 MEKMEGSQGSDECSKTSPSNREEDGYESEENEDESKPNNNGGSSSNSTVDVSSEKKPSVRPYARSKLPRLRWTPDLHLRFVHAIQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVDDPNQVLADHRHLVNSGDRKIYNVSQLPMLQGYNPSQNPTLRYGPYGYGVAPMGVQEKLVHRPFIERISMDEFGAGFYGKMTEKIFGTNGNYINWNTSNVGEQSRNKIHEPRDDHQFLSFVAHESPCTQGGFLSQIDHNPLTHQQPKVQELMLINESTTPTGIENTATNPQELKKLKRKASDIDLDLDLSLKLSSRNVEKMRSQEEDHEVDSNLSLSLYSQSSSSNNYLSSRLKEGNDSWNKEQGKRVITLDLTI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00090 379 Gene3D - 67 124 - -
Bva01g00090 379 MobiDBLite consensus disorder prediction 1 62 - -
Bva01g00090 379 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 6 379 IPR044848 GO:0003700
Bva01g00090 379 PANTHER - 6 379 - -
Bva01g00090 379 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 68 123 IPR006447 GO:0003677
Bva01g00090 379 SUPERFAMILY Homeodomain-like 67 122 IPR009057 -
Bva01g00090 379 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 124 IPR017930 -
Bva01g00090 379 MobiDBLite consensus disorder prediction 37 54 - -
Bva01g00090 379 Pfam Myb-like DNA-binding domain 70 120 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00090 Bva-Chr1 719519 721636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00090 59 125 G2-like Transcription Factor Family AT2G42660 79.104 8.02e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva01g00090 Myb_DNA-binding 4.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00090 - - gsj:114395715 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00090 01 719519 721636 Bva01g00090 01 719519 721636 ECH