Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00064 ATGAACAGGGGAATTGAAGTTCTCTCTCCAGCTTCCTATCTTCAGAATTCTAATTGGTTATTCCAGGAAACCAAGGGAGCCAAATGGACTGCAGAGGAGAATAAAAGGTTTGAGAATGCTCTTGCTTTGTATGATAAGGATACCCCAGATCGTTGGGAGAGGGTAGCAGCCATGCTTCCAGGAAAAACTGTAGGTGATGTGATGAAACAGTATAGAGAACTTGAAGAAGATGTTAGTGTAATTGAGGCAGGGTTGATCCCATTTCCTGGGTACCATGGTAATTCTTTCACACTGGAGTGGGTGAATAGTCTAGGCTCTGATGGCCTCAAGCAATTTTGTACAGTTGGTTGTAAAAGGGGAGCTTGCAGTAGGCCTTCTGAgcaggaaaggaagaaaggagTACCATGGACAGAAGAGGAGCACAGGCAATTCTTGTTGGGTCTCAAGAAGTATGGCAAAGGTGATTGGAGAAGCATCTCTCGTAATTTTGTTACCACAAGAACACCAACTCAGGTTGCCAGTCAtgctcaaaaatattttatcagaCAGCTTACAGGACCGAGAGACAAGAGGAGATCTAGTATCCATGATATCACAATGGTCAATCTACCCGACACAAAATCTCCTTCATCAGACAGTAACAGAGCAACTTCTCCAGATCACAAAAACAAGGATTTGAATCCACAGCAGAATCAGAAATTTTCAGCCATGATTAAGCAGGAAAATGACTGGAAATTAGCATGCGAGGGCATGCCAATGGTTTTCAGCTCTATAAATGGAAACATGTCAATGTCACCAATTCATGGgatttctttgtttggatCAAAATCACAGGATCCATTTGGAACTTATGATACTATTTTTCAGATGCAGCCAATGCATCATTG 887 0.398 MNRGIEVLSPASYLQNSNWLFQETKGAKWTAEENKRFENALALYDKDTPDRWERVAAMLPGKTVGDVMKQYRELEEDVSVIEAGLIPFPGYHGNSFTLEWVNSLGSDGLKQFCTVGCKRGACSRPSEQERKKGVPWTEEEHRQFLLGLKKYGKGDWRSISRNFVTTRTPTQVASHAQKYFIRQLTGPRDKRRSSIHDITMVNLPDTKSPSSDSNRATSPDHKNKDLNPQQNQKFSAMIKQENDWKLACEGMPMVFSSINGNMSMSPIHGISLFGSKSQDPFGTYDTIFQMQPMHH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00064 295 MobiDBLite consensus disorder prediction 183 230 - -
Bva01g00064 295 SMART sant 132 182 IPR001005 -
Bva01g00064 295 SMART sant 25 77 IPR001005 -
Bva01g00064 295 MobiDBLite consensus disorder prediction 199 216 - -
Bva01g00064 295 SUPERFAMILY Homeodomain-like 129 183 IPR009057 -
Bva01g00064 295 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Bva01g00064 295 Pfam Myb-like DNA-binding domain 135 180 IPR001005 -
Bva01g00064 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 128 184 IPR017930 -
Bva01g00064 295 CDD SANT 28 74 IPR001005 -
Bva01g00064 295 SUPERFAMILY Homeodomain-like 28 82 IPR009057 -
Bva01g00064 295 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 245 IPR043363 -
Bva01g00064 295 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 131 183 IPR006447 GO:0003677
Bva01g00064 295 PANTHER TRANSCRIPTION FACTOR DIVARICATA 1 245 - -
Bva01g00064 295 Gene3D - 134 184 - -
Bva01g00064 295 ProSiteProfiles SANT domain profile. 136 184 IPR017884 -
Bva01g00064 295 Gene3D - 21 88 - -
Bva01g00064 295 ProSiteProfiles Myb-like domain profile. 21 75 IPR001005 -
Bva01g00064 295 CDD SANT 135 180 IPR001005 -
Bva01g00064 295 ProSiteProfiles SANT domain profile. 28 79 IPR017884 -
Bva01g00064 295 ProSiteProfiles Myb-like domain profile. 128 180 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00064 Bva-Chr1 508029 510082 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva01g00064 Myb_DNA-binding 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00064 - - gmx:778077 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00064 01 508029 510082 Bva12g01660 12 14061856 14064031 ECH
Bva01g00064 01 508029 510082 Bva01g00064 01 508029 510082 ECH
Bva01g00064 01 508029 510082 Bva12g00207 12 3644460 3646483 ECH