Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00055 ATGGTGAGGATCAAATCCAATCACACAATCCTTCCAAGCGAGCCTACTCCAAAGGGTCGTTTATGGCTATCCAAGTGTGACCAATTAATCCATCCACGGACTTATACACCAACTATCTACATTTACAAGCCCCAACACAGAAATCATACCACCTCCTGCAGTGTAATTGAGAGAATGAGAGACTCCCTAAGCAAGACCTTAGTCCATTACTACCCTCTAGCCGGTCGACTACGCTGCATTGGACGAAAACAATACGAAGTGGACTGCAATGAGATGGGAGTAACACTACTGGAAGCTGAAtctgataaaatattagatgAATATGATGATTTTGCGCCAGATAGCAGCATTAGAGAACTTATTCCCAAGATTGATTTTGGTGAACCAATAGAGAAGTTGCCATTTTTGTTTGTGCAAGTCACAAGGTTCAGTTGTGGTAGCTTTTCTGTTGGGTTTGCCTCTTCCCACATGGTGATGGATGGGGTTTCTGCTACTGACTTTGTCAAGTCATGGGCTAAGCTTGCTCGCGgttacaaattaaacaaagaagaaacacCATCTCTAGATCGAATGGCTCTACAGTCTCAAGAACTGCGTATGGTTCAGGCACCACGCTTTAGACACCGAGAATTTGAGCCATTGCCACTGATATTAAGTCAATCAGACAATACTGAAGAGCGAAACAAAGAGACCAGCattgaattattaaagttCACAAAAGAGGAAGTGGAGAAACTCAAGATCAAAGTCAATCAAGCCACGAAAGTACAAGAAATTGTGGGACAGCATGGTCGACCTTACAGCAAATTTGAAGCTCTTTCTGCTCATATATGGAGGTGTGTAACTAAGGCTCGCCGACCCGATAACCTTCAGCCAACAGTAGTATGGACCGTCGGCGATATCCGGAACAGACTGAATCCACCTCTTCCTGGAAATTATTTTGGGAATGCTGTCTTTCCAACAGTGACACCAGAATGCCTAAGTGGAGATATTATATCAAAGACATTGAGCTATGCTGCAGAAAAGGTAAGAGAATCAATTGAGACTCTCACAGATGAGTACATAAGATCacagtttgattttttaacaaGTGATCAGCTTCACAAGTTTGGAAGTGTCCAAGATCACTTTCTTGGGAACCCTAACCTCACAATTGGGTGCTGGACGGGCATTCCAATCTTTGAAGCAGATTTTGGGTGGGGAAAACCAATCTATGTTGGTTTAGGAGCTTTGGATGGAGATGGTAGCACATTCATTATACCAACCTCTGCTGGGGATGGCTCTCTTATCGTAGCCATTTGCTTACAGAAGACTCACATGAAAGCCTTCAAGATGTTATTCTACGAGgacttagaaaatta 1361 0.4107 MVRIKSNHTILPSEPTPKGRLWLSKCDQLIHPRTYTPTIYIYKPQHRNHTTSCSVIERMRDSLSKTLVHYYPLAGRLRCIGRKQYEVDCNEMGVTLLEAESDKILDEYDDFAPDSSIRELIPKIDFGEPIEKLPFLFVQVTRFSCGSFSVGFASSHMVMDGVSATDFVKSWAKLARGYKLNKEETPSLDRMALQSQELRMVQAPRFRHREFEPLPLILSQSDNTEERNKETSIELLKFTKEEVEKLKIKVNQATKVQEIVGQHGRPYSKFEALSAHIWRCVTKARRPDNLQPTVVWTVGDIRNRLNPPLPGNYFGNAVFPTVTPECLSGDIISKTLSYAAEKVRESIETLTDEYIRSQFDFLTSDQLHKFGSVQDHFLGNPNLTIGCWTGIPIFEADFGWGKPIYVGLGALDGDGSTFIIPTSAGDGSLIVAICLQKTHMKAFKMLFYEDLEN 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00055 453 Coils Coil 236 256 - -
Bva01g00055 453 Gene3D - 217 448 IPR023213 -
Bva01g00055 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 450 - -
Bva01g00055 453 Pfam Transferase family 1 448 - -
Bva01g00055 453 Gene3D - 1 213 IPR023213 -
Bva01g00055 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00055 Bva-Chr1 433444 434805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00055 2 449 Monolignol Biosynthesis Gene Families AT5G48930 35.938 1.42e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00055 K13065 - gmx:100779652 458.759