Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00054 ATGGTGTCCGTCTGTATCAAATCCTCCTACACAGTCACTCCAATCCACCCTACTCCAAATGATCCTTTGTGGCTCTCTGAATTTGACCAATTATACCACCCAGCAATTTCATTCGTATCTACAGTCTATGTTTACAAGCCAAATCAGAACCAAAGTACCATATTCTCCAACGCTACTGAAATCATGAGAGACTCTCTTAGCAAGATCTTAGTCCACTACTACCCTGTCGCTGGTCGATTACGCGGCATAGATGGGGGAAGATTCGAAATAGATTGTAATGCAAAGGGAGTGACAATGTTGGAAGCTGAATCCACAAAAACAGTTGATGAATATGGTGATTTTCTACCCAGGGAGCCGATTAAAGAGCTCCTTCCCACGTTGGAGGTTGATTTGGGCACGCCAATGGATGATGTTCCCTTGATGCTGGTTCAATTGACAAGATTCAGATGTGGTAGCCTTTGTGTTGCGACTAAAATTTCACATTCTCTTTTCGATGGCATATCTGGTTTTCATTTCATCAAGTCATGGACCAAGATTGCTCGCGGAGAAGCTctggaagaagatgaaatgcCATTTATGGATCGAACCATTCTCAAGTCTCGGCCACCATTGATGGCACCTTGCATTGAGCACCGAGAGTTCAAGCCGTTTCCTCGTTTACGAGGTGGCACCAGTGGCAACAAGGGAGATCAGGCGAAAAAGGACACAGAAGTTGCACTTTTGGAGCTCACAAGTGAGCAAGTGGGGAAGATAAAGAACAAAGCCAATCAAGTCCCAAATGAACATGACACTGAGGTGCCGTTAGACCGTCCCTACAGCAGATTTGAATCAATAGCTGCCCATCTATGGAGATCCATCGCTAAAGCTCGGCAAAATGATACCCATCAACCAACACTTATTGTGACTATTGGTGATATCCGCAATAGACTGAAGCCTCAACTGCCTAAAAATTACATTGGAAATGCTATAGTTCAGACAGTGACTCCCACATGTCTGACTGGGGATATCATATCAAAACCACTGAGCTATGTTGCCAACAAGGTAAGGGGAGTAAGTGACATACTTACAGATGAGTATATAAGGTCTCAACTGAATATTTTAACGAGTCAGGATCGAGTGGATTGGGTCAAGTCCCCGATTCGCAGCCATGAACACATTGAAGATCACTTTCATGGGAACcctaatatttttcttgcaaGTTGGTTGGGAATGCCAGTGAATGGAGCAGATTTTGGTTGGGGAAAGCCATTCCATATAGTTGCAGGAACTTTTGGTGGAGATGGCACCATATTAATCATGCCAGGCCTTATTGAAGACGGTTCTCTCTTGATACTCATTTCCTTGGAAATATCTCACATTGAAGCTTTCAAGACGTTCTTCTATGAGGACATATG 1394 0.4275 MVSVCIKSSYTVTPIHPTPNDPLWLSEFDQLYHPAISFVSTVYVYKPNQNQSTIFSNATEIMRDSLSKILVHYYPVAGRLRGIDGGRFEIDCNAKGVTMLEAESTKTVDEYGDFLPREPIKELLPTLEVDLGTPMDDVPLMLVQLTRFRCGSLCVATKISHSLFDGISGFHFIKSWTKIARGEALEEDEMPFMDRTILKSRPPLMAPCIEHREFKPFPRLRGGTSGNKGDQAKKDTEVALLELTSEQVGKIKNKANQVPNEHDTEVPLDRPYSRFESIAAHLWRSIAKARQNDTHQPTLIVTIGDIRNRLKPQLPKNYIGNAIVQTVTPTCLTGDIISKPLSYVANKVRGVSDILTDEYIRSQLNILTSQDRVDWVKSPIRSHEHIEDHFHGNPNIFLASWLGMPVNGADFGWGKPFHIVAGTFGGDGTILIMPGLIEDGSLLILISLEISHIEAFKTFFYEDI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00054 464 Gene3D - 1 216 IPR023213 -
Bva01g00054 464 Gene3D - 225 463 IPR023213 -
Bva01g00054 464 Pfam Transferase family 3 461 - -
Bva01g00054 464 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 6 464 - -
Bva01g00054 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00054 Bva-Chr1 427769 429709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00054 2 462 Monolignol Biosynthesis Gene Families AT5G48930 34.914 1.49e-89 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00054 K13065 - gmx:100779652 414.075