Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00045 ATGCAATTAAGTGTCAGCATTTTCCTCATTCTTGTTTTTGCTCCTCTTCTTATTCTCTCAGTGGATACAGCTTTCAATGATGATGTGTTGGGGTTGATTGTGTTCAAAGCTGGCCTTGAAGACCCAAAAGCTAAACTTGTGTCATGGAATGAAGATGATGCGAATCCCTGCAACTGGGACGGAGTCAAATGCGATCCTAGCACCAATCGGGTTTCTGCTCTTGTTCTTGATGGGTTTTCTCTTTCTGGGCATATTGATAAAGGGCTCTTAAGATTGCAGTTCCTTCAAATTCTGTCACTTTCCAGGAATAACTTAACAGGGACCATAAATCCTGATCTTACTCGCCTTGGAGGTTTACAAGTTGTTGATTTGAGTGAGAATAATCTCTCAGGTTCAATTTCAGATGGATTTTTCCAGCAATGTGGGTCTCTGAGATCAGTTTCCTTTGCCAAAAATAACCTCACAGGTAAAATTCCTGATTCTTTGAACTCATGCTCCACTTTGGCAACTGTTAACTTTTCGTCCAATCAACTATATGGGGAATTGCCATCTGGAATATGGTATCTAAGGGGATTACAAGCACTTGATCTGTCAAACAACTTCCTAGAGGGAGAGATTCCTCAACGGATTGAGAATTTGTATGATTTAAGGGAGTTAAGTCTACAGAAGAACCGCTTCATTGGTAGGCTTCCTGTGGGTATTGGAGGATGCTTGGTTTTGAAATCACTTgattttagtaataattttctctctgGAGGACTTCCCGAGTCAATACAAAGACTCAGTTCATGCAAATCCCTTAGTTTACAAGGGAATTCATTCACAGGAGGCATTTCTGAATGGATTGgagaattgaaaaatttagagatGTTGGATCTTTCTGCAAATAGATTTTCTGGTTGGATTCCTAAATCAATAGGAAATCTTGATTCCTTGAATAAACTAAATCTATCCAGAAACCATATTACAGGAAACTTGCCAGAATCAATGGCAAACTGCACTAAGCTTTTGGCCCTTGATATCAGCTACAACCAATTGACTGGAAATCTTCCTTCATGGATTTTTAGGATGGGTTTGGAAAGTATCTCACTTTCAGGGAACAGCTTTGGTAGGAGTAAATATCCTTCACTTACTTCCACACCTGCATTTTATCATGGTCTTCAGGTTTTGGATTTGTCATCAAATGCATTTTCTGGTGAAATTCCGTCTGGCATTAGCAGTCTTAATAGCTTGCAAGTCTTAAATATGTCCACCAACAACATCTCTGGCTCAATTCCGTCCGGTATAGGAGAACTTAAATCTTTATCCATTCTTGATTTGAGTGACAACAAGCTTAGTGGAAGCATTCCTTCTCAAATAGACGGGGCAATTTCACTCATTGAACTGAGGCTGCAAAAGAACTTTCTCGGTGGGAGAATTCCAACCCAAATTGACAAGTGCAATTCGTTATCATCTTTGATTCTTTCTCACAACAAGCTTAATGGTTCAATCCCAGCAGCCATTGCAAACCTAACCGATCTTCAGAACGTAGACTTATCATGGAATGAGCTCTCTGGAAGCTTACCCAAGGAACTAGCTAATCTTTCCCTTCTTATGTCCTTTAATGTCTCCCACAACCACCTTCAAGGTGAGCTACCAGTGGGTGGCTTCTTTAATACCATCTCTCCCTCATCTCTCATTGGCAACCCATCTTTGTGTGGTTCTGTTGTTAATCACTCCTGCCCATCTGTCCACCCCAAACCTTTTGTTCTTAATCCTAACTCTTCTTACTCCAACTCTAGTTCTTCCCTAGATGGTGGTCATAAGAAGATTATTTTCAGTATCTCTGCCCTTATTGCTATTGGGGCTGCTGCTTTTATTGCCATTGGTGTGGTTGCTGTGACTATCCTAAATATCCATGTTCGTCATTCAATGTCACGAAATGCTGCTCCATTTGCATTCTCCGGTGGTGAGGATTTCAGGTATTCACCCACAAGTGATCCAAACTATGGCAAGCTTGTGATGTTTTCTGGAGATGCTGACTTCGCCGATGGGGCACATAATCTTCTCAATAAAGACAATGAAATTGGCCGTGGTGGATTTGGAGTTGTCTATCGTACTGTCACTCGAGACGGGCATTCTGTTGCAATCAAGAAGCTTACAGTGTCAAGTTTGATCAAATCACAAGAAGACTTTGAGAGGGAAGTGAAAATACTTGGGAAGATGAGACACCAAAATCTTTTGGCACTGGAAGGATATTACTGGACTTCATCCTTGCAGCTCCTTATATATGAATACATATCAAGAGGGAGTTTGCATAAGCTTCTACATGATGAGAACAGCAGGAACGTCCTTTCTTGGCGGCAAAGGTTCAATATAATTCTTGGCATGGCAAAAGGTTTGGCCTATTTGCACCAAATGAACATAATCCACTACAATCTAAAATCTACCAATGTTCTGATTGATCATTCTGGCGAGCCAAAAATAGGAGACTATGGCTTGGTGAGGCTATTACCAACTCTAGACCATTGTGTTTTGAGCAGCAAAATTCAGAGTGCACTAGGATACATGGCTCCAGAGTTTGCCTGCCGCACGGTTAAGATAACTGAGAAATGTGATGTATATGGTTTTGGGATTCTGGTTTTGGAGGTGGTGACCGGAAAAAGACCGGTGGAATACATGGAAGATGATGTAATTGTTCTGTGTGACATGGTAAGAAGTTCATTGGAGGTGGAGCAATGTATTGATGAGAAGCTTCTGGGTAATTTTGCTGCAGAAGAAGCCATTCCTGTCATTAAATTGGGACTGATTTGTGCATCACAAGTGCCTTCGAATCGTCCAGACATGGCCGAGGTAATCAACATATTAGAATTGATTCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATG 2891 0.4061 MQLSVSIFLILVFAPLLILSVDTAFNDDVLGLIVFKAGLEDPKAKLVSWNEDDANPCNWDGVKCDPSTNRVSALVLDGFSLSGHIDKGLLRLQFLQILSLSRNNLTGTINPDLTRLGGLQVVDLSENNLSGSISDGFFQQCGSLRSVSFAKNNLTGKIPDSLNSCSTLATVNFSSNQLYGELPSGIWYLRGLQALDLSNNFLEGEIPQRIENLYDLRELSLQKNRFIGRLPVGIGGCLVLKSLDFSNNFLSGGLPESIQRLSSCKSLSLQGNSFTGGISEWIGELKNLEMLDLSANRFSGWIPKSIGNLDSLNKLNLSRNHITGNLPESMANCTKLLALDISYNQLTGNLPSWIFRMGLESISLSGNSFGRSKYPSLTSTPAFYHGLQVLDLSSNAFSGEIPSGISSLNSLQVLNMSTNNISGSIPSGIGELKSLSILDLSDNKLSGSIPSQIDGAISLIELRLQKNFLGGRIPTQIDKCNSLSSLILSHNKLNGSIPAAIANLTDLQNVDLSWNELSGSLPKELANLSLLMSFNVSHNHLQGELPVGGFFNTISPSSLIGNPSLCGSVVNHSCPSVHPKPFVLNPNSSYSNSSSSLDGGHKKIIFSISALIAIGAAAFIAIGVVAVTILNIHVRHSMSRNAAPFAFSGGEDFRYSPTSDPNYGKLVMFSGDADFADGAHNLLNKDNEIGRGGFGVVYRTVTRDGHSVAIKKLTVSSLIKSQEDFEREVKILGKMRHQNLLALEGYYWTSSLQLLIYEYISRGSLHKLLHDENSRNVLSWRQRFNIILGMAKGLAYLHQMNIIHYNLKSTNVLIDHSGEPKIGDYGLVRLLPTLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVIVLCDMVRSSLEVEQCIDEKLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00045 963 Pfam Protein kinase domain 684 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00045 963 SUPERFAMILY L domain-like 44 370 - -
Bva01g00045 963 SMART LRR_sd22_2 189 215 - -
Bva01g00045 963 SMART LRR_sd22_2 432 455 - -
Bva01g00045 963 SMART LRR_sd22_2 504 530 - -
Bva01g00045 963 SMART LRR_sd22_2 285 311 - -
Bva01g00045 963 Gene3D Phosphorylase Kinase; domain 1 672 759 - -
Bva01g00045 963 ProSiteProfiles Protein kinase domain profile. 683 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00045 963 SUPERFAMILY Protein kinase-like (PK-like) 682 955 IPR011009 -
Bva01g00045 963 SMART LRR_typ_2 116 140 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 285 308 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 408 430 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 504 527 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 528 552 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 213 237 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 432 456 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 189 212 IPR003591 -
Bva01g00045 963 SMART LRR_typ_2 309 333 IPR003591 -
Bva01g00045 963 Gene3D Ribonuclease Inhibitor 25 303 IPR032675 -
Bva01g00045 963 Gene3D Transferase(Phosphotransferase) domain 1 760 961 - -
Bva01g00045 963 PRINTS Leucine-rich repeat signature 119 132 - -
Bva01g00045 963 PRINTS Leucine-rich repeat signature 432 445 - -
Bva01g00045 963 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 954 - -
Bva01g00045 963 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Bva01g00045 963 CDD STKc_IRAK 689 952 - -
Bva01g00045 963 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Bva01g00045 963 Pfam Leucine Rich Repeat 192 213 IPR001611 GO:0005515
Bva01g00045 963 Pfam Leucine Rich Repeat 240 261 IPR001611 GO:0005515
Bva01g00045 963 Pfam Leucine rich repeat 386 445 IPR001611 GO:0005515
Bva01g00045 963 Pfam Leucine rich repeat 265 322 IPR001611 GO:0005515
Bva01g00045 963 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 954 - -
Bva01g00045 963 SUPERFAMILY L domain-like 291 557 - -
Bva01g00045 963 Gene3D Ribonuclease Inhibitor 304 580 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00045 Bva-Chr1 344609 348539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00045 3 962 Receptor kinase-like Gene Family AT3G56370 61.998 0.0 1149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bva01g00045 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00045 - - gmx:100790365 1540.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00045 01 344609 348539 Bva02g00508 02 6418575 6422835 BWGD