Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva01g00045 | ATGCAATTAAGTGTCAGCATTTTCCTCATTCTTGTTTTTGCTCCTCTTCTTATTCTCTCAGTGGATACAGCTTTCAATGATGATGTGTTGGGGTTGATTGTGTTCAAAGCTGGCCTTGAAGACCCAAAAGCTAAACTTGTGTCATGGAATGAAGATGATGCGAATCCCTGCAACTGGGACGGAGTCAAATGCGATCCTAGCACCAATCGGGTTTCTGCTCTTGTTCTTGATGGGTTTTCTCTTTCTGGGCATATTGATAAAGGGCTCTTAAGATTGCAGTTCCTTCAAATTCTGTCACTTTCCAGGAATAACTTAACAGGGACCATAAATCCTGATCTTACTCGCCTTGGAGGTTTACAAGTTGTTGATTTGAGTGAGAATAATCTCTCAGGTTCAATTTCAGATGGATTTTTCCAGCAATGTGGGTCTCTGAGATCAGTTTCCTTTGCCAAAAATAACCTCACAGGTAAAATTCCTGATTCTTTGAACTCATGCTCCACTTTGGCAACTGTTAACTTTTCGTCCAATCAACTATATGGGGAATTGCCATCTGGAATATGGTATCTAAGGGGATTACAAGCACTTGATCTGTCAAACAACTTCCTAGAGGGAGAGATTCCTCAACGGATTGAGAATTTGTATGATTTAAGGGAGTTAAGTCTACAGAAGAACCGCTTCATTGGTAGGCTTCCTGTGGGTATTGGAGGATGCTTGGTTTTGAAATCACTTgattttagtaataattttctctctgGAGGACTTCCCGAGTCAATACAAAGACTCAGTTCATGCAAATCCCTTAGTTTACAAGGGAATTCATTCACAGGAGGCATTTCTGAATGGATTGgagaattgaaaaatttagagatGTTGGATCTTTCTGCAAATAGATTTTCTGGTTGGATTCCTAAATCAATAGGAAATCTTGATTCCTTGAATAAACTAAATCTATCCAGAAACCATATTACAGGAAACTTGCCAGAATCAATGGCAAACTGCACTAAGCTTTTGGCCCTTGATATCAGCTACAACCAATTGACTGGAAATCTTCCTTCATGGATTTTTAGGATGGGTTTGGAAAGTATCTCACTTTCAGGGAACAGCTTTGGTAGGAGTAAATATCCTTCACTTACTTCCACACCTGCATTTTATCATGGTCTTCAGGTTTTGGATTTGTCATCAAATGCATTTTCTGGTGAAATTCCGTCTGGCATTAGCAGTCTTAATAGCTTGCAAGTCTTAAATATGTCCACCAACAACATCTCTGGCTCAATTCCGTCCGGTATAGGAGAACTTAAATCTTTATCCATTCTTGATTTGAGTGACAACAAGCTTAGTGGAAGCATTCCTTCTCAAATAGACGGGGCAATTTCACTCATTGAACTGAGGCTGCAAAAGAACTTTCTCGGTGGGAGAATTCCAACCCAAATTGACAAGTGCAATTCGTTATCATCTTTGATTCTTTCTCACAACAAGCTTAATGGTTCAATCCCAGCAGCCATTGCAAACCTAACCGATCTTCAGAACGTAGACTTATCATGGAATGAGCTCTCTGGAAGCTTACCCAAGGAACTAGCTAATCTTTCCCTTCTTATGTCCTTTAATGTCTCCCACAACCACCTTCAAGGTGAGCTACCAGTGGGTGGCTTCTTTAATACCATCTCTCCCTCATCTCTCATTGGCAACCCATCTTTGTGTGGTTCTGTTGTTAATCACTCCTGCCCATCTGTCCACCCCAAACCTTTTGTTCTTAATCCTAACTCTTCTTACTCCAACTCTAGTTCTTCCCTAGATGGTGGTCATAAGAAGATTATTTTCAGTATCTCTGCCCTTATTGCTATTGGGGCTGCTGCTTTTATTGCCATTGGTGTGGTTGCTGTGACTATCCTAAATATCCATGTTCGTCATTCAATGTCACGAAATGCTGCTCCATTTGCATTCTCCGGTGGTGAGGATTTCAGGTATTCACCCACAAGTGATCCAAACTATGGCAAGCTTGTGATGTTTTCTGGAGATGCTGACTTCGCCGATGGGGCACATAATCTTCTCAATAAAGACAATGAAATTGGCCGTGGTGGATTTGGAGTTGTCTATCGTACTGTCACTCGAGACGGGCATTCTGTTGCAATCAAGAAGCTTACAGTGTCAAGTTTGATCAAATCACAAGAAGACTTTGAGAGGGAAGTGAAAATACTTGGGAAGATGAGACACCAAAATCTTTTGGCACTGGAAGGATATTACTGGACTTCATCCTTGCAGCTCCTTATATATGAATACATATCAAGAGGGAGTTTGCATAAGCTTCTACATGATGAGAACAGCAGGAACGTCCTTTCTTGGCGGCAAAGGTTCAATATAATTCTTGGCATGGCAAAAGGTTTGGCCTATTTGCACCAAATGAACATAATCCACTACAATCTAAAATCTACCAATGTTCTGATTGATCATTCTGGCGAGCCAAAAATAGGAGACTATGGCTTGGTGAGGCTATTACCAACTCTAGACCATTGTGTTTTGAGCAGCAAAATTCAGAGTGCACTAGGATACATGGCTCCAGAGTTTGCCTGCCGCACGGTTAAGATAACTGAGAAATGTGATGTATATGGTTTTGGGATTCTGGTTTTGGAGGTGGTGACCGGAAAAAGACCGGTGGAATACATGGAAGATGATGTAATTGTTCTGTGTGACATGGTAAGAAGTTCATTGGAGGTGGAGCAATGTATTGATGAGAAGCTTCTGGGTAATTTTGCTGCAGAAGAAGCCATTCCTGTCATTAAATTGGGACTGATTTGTGCATCACAAGTGCCTTCGAATCGTCCAGACATGGCCGAGGTAATCAACATATTAGAATTGATTCAATGCCCTTCAGAAGGACAAGAGGAATTAGAATG | 2891 | 0.4061 | MQLSVSIFLILVFAPLLILSVDTAFNDDVLGLIVFKAGLEDPKAKLVSWNEDDANPCNWDGVKCDPSTNRVSALVLDGFSLSGHIDKGLLRLQFLQILSLSRNNLTGTINPDLTRLGGLQVVDLSENNLSGSISDGFFQQCGSLRSVSFAKNNLTGKIPDSLNSCSTLATVNFSSNQLYGELPSGIWYLRGLQALDLSNNFLEGEIPQRIENLYDLRELSLQKNRFIGRLPVGIGGCLVLKSLDFSNNFLSGGLPESIQRLSSCKSLSLQGNSFTGGISEWIGELKNLEMLDLSANRFSGWIPKSIGNLDSLNKLNLSRNHITGNLPESMANCTKLLALDISYNQLTGNLPSWIFRMGLESISLSGNSFGRSKYPSLTSTPAFYHGLQVLDLSSNAFSGEIPSGISSLNSLQVLNMSTNNISGSIPSGIGELKSLSILDLSDNKLSGSIPSQIDGAISLIELRLQKNFLGGRIPTQIDKCNSLSSLILSHNKLNGSIPAAIANLTDLQNVDLSWNELSGSLPKELANLSLLMSFNVSHNHLQGELPVGGFFNTISPSSLIGNPSLCGSVVNHSCPSVHPKPFVLNPNSSYSNSSSSLDGGHKKIIFSISALIAIGAAAFIAIGVVAVTILNIHVRHSMSRNAAPFAFSGGEDFRYSPTSDPNYGKLVMFSGDADFADGAHNLLNKDNEIGRGGFGVVYRTVTRDGHSVAIKKLTVSSLIKSQEDFEREVKILGKMRHQNLLALEGYYWTSSLQLLIYEYISRGSLHKLLHDENSRNVLSWRQRFNIILGMAKGLAYLHQMNIIHYNLKSTNVLIDHSGEPKIGDYGLVRLLPTLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVIVLCDMVRSSLEVEQCIDEKLLGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE | 963 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva01g00045 | 963 | Pfam | Protein kinase domain | 684 | 945 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bva01g00045 | 963 | SUPERFAMILY | L domain-like | 44 | 370 | - | - | |
Bva01g00045 | 963 | SMART | LRR_sd22_2 | 189 | 215 | - | - | |
Bva01g00045 | 963 | SMART | LRR_sd22_2 | 432 | 455 | - | - | |
Bva01g00045 | 963 | SMART | LRR_sd22_2 | 504 | 530 | - | - | |
Bva01g00045 | 963 | SMART | LRR_sd22_2 | 285 | 311 | - | - | |
Bva01g00045 | 963 | Gene3D | Phosphorylase Kinase; domain 1 | 672 | 759 | - | - | |
Bva01g00045 | 963 | ProSiteProfiles | Protein kinase domain profile. | 683 | 952 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bva01g00045 | 963 | SUPERFAMILY | Protein kinase-like (PK-like) | 682 | 955 | IPR011009 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 116 | 140 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 285 | 308 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 408 | 430 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 504 | 527 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 528 | 552 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 213 | 237 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 432 | 456 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 189 | 212 | IPR003591 | - | |
Bva01g00045 | 963 | SMART | LRR_typ_2 | 309 | 333 | IPR003591 | - | |
Bva01g00045 | 963 | Gene3D | Ribonuclease Inhibitor | 25 | 303 | IPR032675 | - | |
Bva01g00045 | 963 | Gene3D | Transferase(Phosphotransferase) domain 1 | 760 | 961 | - | - | |
Bva01g00045 | 963 | PRINTS | Leucine-rich repeat signature | 119 | 132 | - | - | |
Bva01g00045 | 963 | PRINTS | Leucine-rich repeat signature | 432 | 445 | - | - | |
Bva01g00045 | 963 | PANTHER | LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN | 3 | 954 | - | - | |
Bva01g00045 | 963 | ProSitePatterns | Protein kinases ATP-binding region signature. | 689 | 712 | IPR017441 | GO:0005524 | |
Bva01g00045 | 963 | CDD | STKc_IRAK | 689 | 952 | - | - | |
Bva01g00045 | 963 | Pfam | Leucine rich repeat N-terminal domain | 26 | 65 | IPR013210 | - | |
Bva01g00045 | 963 | Pfam | Leucine Rich Repeat | 192 | 213 | IPR001611 | GO:0005515 | |
Bva01g00045 | 963 | Pfam | Leucine Rich Repeat | 240 | 261 | IPR001611 | GO:0005515 | |
Bva01g00045 | 963 | Pfam | Leucine rich repeat | 386 | 445 | IPR001611 | GO:0005515 | |
Bva01g00045 | 963 | Pfam | Leucine rich repeat | 265 | 322 | IPR001611 | GO:0005515 | |
Bva01g00045 | 963 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 3 | 954 | - | - | |
Bva01g00045 | 963 | SUPERFAMILY | L domain-like | 291 | 557 | - | - | |
Bva01g00045 | 963 | Gene3D | Ribonuclease Inhibitor | 304 | 580 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva01g00045 | Bva-Chr1 | 344609 | 348539 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva01g00045 | 3 | 962 | Receptor kinase-like Gene Family | AT3G56370 | 61.998 | 0.0 | 1149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-1 | Bva01g00045 | Pkinase | 1.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva01g00045 | - | - | gmx:100790365 | 1540.78 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva01g00045 | 01 | 344609 | 348539 | Bva02g00508 | 02 | 6418575 | 6422835 | BWGD |