Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00038 ATGAGTTCTGATCAGCCACTGCTGCGAGAATCAGATCCTTCTTGTGCAATTGATCACCTTTCTCGGAAATCAGCAGCCCTAAACAGTCTATACCATAATGTTTCCTTCTCATCTCCTAGTTATGATGATGCTCAAAGCAGTAATTCGGATGTGAAGGACGGGGACTCTATATTTGCTGGAGATTCTAGTTTTCATTCTGCTGTTGAACACTTCCAAGCTACTGAAGCTCAGTTTTCCCAGCAGTTTCCTTTGGAATGCCCCACGAGGGAGAGGAGACGCCTAGTGTCGTGGGGTGCAATGGAACTGCATGAAATCAATAACAGTAGCATGTCCTTTGAGATTTCTAGAGGTTCATCACAATTGCAAGACAAGTGCAGTAAGTCTCAGAGAATTCGTCACAAGAGTGTGCAATTTGAAGAAAACACCTTACATGAAGATAATGCGAGGCTGATCTACATCAACGATCCAAAGAAGACAAACGACAAGTATGAGTTCACAGGGAATGAGATCCGAACCAGCAGATACACTATCATCACTTTCCTACCCAAGAATCTTTTCATTCAGTTCCATCGGGTTGCTTACTTGTATTTCCTTGCCATTGCTGCTCTCAACCAGCTTCCTCCACTTGCTGTCTTTGGGAGAACGGTGTCACTTTTCCCCCTTTTGTTTGTGCTCTGTGTCACTGCTATTAAGGATGGCTATGAGGATTGGCGGAGGCACAGGTCCGACCGCAATGAAAATAACCGAGAGTCTCTGGTAATTCAATCCGGTGAATTCAAGccaaagaaatggaaaaaaatacaagCTGGAGAGGTTGTGAAGATCTTTGCTGATGAGACAATTCCAGCTGACATGGTTTTGTTGGGCACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGCGAGTCAAATTTGAAGACGAGGTATGCCCGCCAAGAAACAGCTTCAGCAGTATTACCAGAACATTGTGGCATTTCTGGGGTTATTAGATGCGAGCAACCTAACAGGAATATTTATGAATTCACCGCTAACATGGAGTTCAATGGACATAAGTTTCCCCTTAGCCAATCAAATATTGTTTTGCGGGGTTGCCAACTGAAGAATACTGATTGGATCATTGGGGTTGTGGTTTATGCAGGACAGGAAACAAAAGCAATGTTGAACAGTGCTGCTTCCCCTTCGAAGAGAAGCAAACTTGAAAGTTACATGAACAGGGAAACCTTTtggttgtcaatttttttgtttatcatgTGTTCTGTTGTTGGCGTTGGAATGGGCCTTTGGCTTATACGCCATAAAGACCAACTAGATACCTTGCCTTACTACAGAAAAAAGTACTTCACACCGGGGCCAGATAATGGAAAGAAATATAGATATTATGGGATACCGATGGAaacatttttctcatttttgagTTCAATTATAGTGTTTCAGATAATGATACCGATATCTCTTTACATTACCATGGAGTTGGTTCGTTTGGGTCAGTCATACTTTATGATTGAAGACAGGGATATGTATGATTCTAGCTCTGGATCAAGGTTCCAGTGTAGATCATTGAATATAAATGAAGATTTGGGTCAAATACGTTACATATTTTCAGACAAGACAGGAACACTAACAGAAAACAGAATGGAGTTCCGAAGAGCTAGTATACATGGAAAGAATTATGGGAGTTCCTTGCTTATGACTGATAACAGTTCAGCAGCAGCTAGTAGTAAATGGAAGCTCAAATCGGAAATTGCTGTGGATTCTGAACTCATGGGAATGTTGCAAGGCAACTCAAATAGTGATGAAAGGATTTCTGGACATGAGTTTTTCCTTACACTGGCTGCTTGTAATACTGTGATCCCTATTCTTAGTCATGGTAGATTTTCTAGTTGTGGAACAAGTGAATCAAACCAAGAAATAGAAGGTATTGATTATCAAGGAGAATCACCTGATGAACAGGCTCTAGTTGCTGCAGCCTCAGCATATGGATATACACTTTTTGAGCGAACATCTGGGCATATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGACGTATTGGGTCTGCACGAGTTTGATAGTGTTCGCAAACGGATGTCTGTTGTTATTCGCCTTCCAAACAATTCTGTTAAGGTTTTAGTTAAAGGTGCTGATACTTCAATGTTCAGCATTTTAGCAAATGGCAGTGAGAGTAATGATAGTATCCGGAATGCAACTCAGGGTCATTTAAATGAATATTCTTTGCAAGGTTTGCGCACTCTTGTAGTTGCGTCCAGGGATCTTTCAGGTGCTGAACTTGAGCAGTGGCAAAGCATGTACGAAGATGCGAGTACTTCACTGACAGACAGAGGTGCAAAGCTTCGTCAAACAGCAGCTCTTATAGAGTGCAACTTAAAGCTGCTTGGAGCAACTGGAATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAATGCCTGCGTCAAGCAGGAATTAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAAACGGCCATTTCAATTGGTCTCTCCTGCAAACTTCTCACTGCAGACATGCAGCAGATTATTATAAATGGCACTTCTGAAGTTGAATGCAGAAATCTCTTGCATGATGCTATAGCGAAATATGGTGTGAGATGTTCCAGTGTAAGAGATCAGAATCAAAGCCACAAAACAAATGCAGGACATGATGATCTAGAGATTTCCGATGGTACAAAGACATTGAGTATGTCCAAAAGAATTccaggaaaagaagaaggaactAATGCCCCGCTGGCACTCATAATTGATGGAAACAgtttggtttatattttagagaagGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCCTTGCAGAAAGCAGGAATTGTTGATTTGATAAAGTGCCGCACTGATGATATGACATTGGCCATAGGCGATGGAGCCAATGATGTGTCGATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGACAGGAAGGGCGCCAAGCTGTGATGGCATCAGATTTTGCTATGGGACAGTTTCGGTTCTTGAAAAGATTACTTCTAGTGCATGGACACTGGAATTATCAGCGTGTTGGTTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTTTTGATGCTATTCTGGTATATACTGTGCACTGCTTTCTCTACAACTTCTGCATTAACAGATTGGAGCAGTGTATTCTATTCTGTTATATACACATCTATACCTACAATTATTGTTGGTGTTCTGGACAAAGACTTGAGTCATAAGACACTCTTGCAGTATCCAAAACTGTATGGTGCGGGGTACCGGCAGGAGGCTTACAATCTGCATTTGTTTTGGATCACAATGGCCGACACACTATGGCAGAGCCTTGTTATCTTCTACATACCCATGTTCACCTATAAAGATAGCTCAATTGACATATGGAGCATGGGAAGTTTGTGGACAATTGCAGTTGTTGTCCTTGTAAATGTACACTTGGCTATGGATATTCAACGTTGGGTATTAATTACTCATCTTGCTGTATGGGGATCAATAGTCATTACGTATGGTTGTATGGTGGTATTGGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATCATCTGGCAAGATA 3674 0.4061 MSSDQPLLRESDPSCAIDHLSRKSAALNSLYHNVSFSSPSYDDAQSSNSDVKDGDSIFAGDSSFHSAVEHFQATEAQFSQQFPLECPTRERRRLVSWGAMELHEINNSSMSFEISRGSSQLQDKCSKSQRIRHKSVQFEENTLHEDNARLIYINDPKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVIQSGEFKPKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASAVLPEHCGISGVIRCEQPNRNIYEFTANMEFNGHKFPLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSKLESYMNRETFWLSIFLFIMCSVVGVGMGLWLIRHKDQLDTLPYYRKKYFTPGPDNGKKYRYYGIPMETFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDSSSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENRMEFRRASIHGKNYGSSLLMTDNSSAAASSKWKLKSEIAVDSELMGMLQGNSNSDERISGHEFFLTLAACNTVIPILSHGRFSSCGTSESNQEIEGIDYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRLPNNSVKVLVKGADTSMFSILANGSESNDSIRNATQGHLNEYSLQGLRTLVVASRDLSGAELEQWQSMYEDASTSLTDRGAKLRQTAALIECNLKLLGATGIEDKLQEGVPEAIECLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSEVECRNLLHDAIAKYGVRCSSVRDQNQSHKTNAGHDDLEISDGTKTLSMSKRIPGKEEGTNAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKCRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGVLDKDLSHKTLLQYPKLYGAGYRQEAYNLHLFWITMADTLWQSLVIFYIPMFTYKDSSIDIWSMGSLWTIAVVVLVNVHLAMDIQRWVLITHLAVWGSIVITYGCMVVLDSIPVFPNYWTIYHLAR 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00038 1224 Pfam Phospholipid-translocating P-type ATPase C-terminal 1016 1222 IPR032630 -
Bva01g00038 1224 Coils Coil 1222 1224 - -
Bva01g00038 1224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 471 562 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00038 1224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 958 1074 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva01g00038 1224 Gene3D - 522 534 - -
Bva01g00038 1224 SFLD Haloacid Dehalogenase 522 1039 - -
Bva01g00038 1224 Gene3D - 548 572 IPR023299 GO:0000166
Bva01g00038 1224 Gene3D - 227 393 - -
Bva01g00038 1224 Gene3D - 535 547 IPR023214 -
Bva01g00038 1224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 544 817 IPR023299 GO:0000166
Bva01g00038 1224 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 140 1223 - -
Bva01g00038 1224 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 140 1223 - -
Bva01g00038 1224 SUPERFAMILY HAD-like 533 1034 IPR036412 -
Bva01g00038 1224 Pfam Cation transport ATPase (P-type) 638 725 - -
Bva01g00038 1224 CDD P-type_ATPase_APLT_Dnf-like 167 1148 - -
Bva01g00038 1224 Pfam E1-E2 ATPase 249 496 - -
Bva01g00038 1224 ProSitePatterns E1-E2 ATPases phosphorylation site. 540 546 IPR018303 -
Bva01g00038 1224 Gene3D - 646 782 IPR023299 GO:0000166
Bva01g00038 1224 PRINTS P-type cation-transporting ATPase superfamily signature 988 1007 - -
Bva01g00038 1224 PRINTS P-type cation-transporting ATPase superfamily signature 538 552 - -
Bva01g00038 1224 SUPERFAMILY Calcium ATPase, transduction domain A 248 390 IPR008250 -
Bva01g00038 1224 SUPERFAMILY Calcium ATPase, transmembrane domain M 165 1221 IPR023298 -
Bva01g00038 1224 Pfam Phospholipid-translocating ATPase N-terminal 151 216 IPR032631 -
Bva01g00038 1224 SFLD p-type atpase 522 1039 IPR044492 -
Bva01g00038 1224 Gene3D - 801 1028 IPR023214 -
Bva01g00038 1224 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 165 1212 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00038 Bva-Chr1 262402 270509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00038 128 1224 Primary Pumps ATPases AT5G04930 57.439 0.0 1287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00038 K14802 - gmx:100812459 2018.82