Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00015 atgatattatatgatttaaccATAAGAGgaaagacagagagagagatggaagAGGTGTTTTGGTCAGTGGCTCTGGTAGCGATCAGCATCGTCATAGTAATAGCAAAGCTTGTTTGTGAAAATGTTTGGTTGGAACCTCGAAGGATCCGATCAGTGCTTGAGAAGCAGGGCATCAAAGGTCCAAagccttcttttcttttcggtAACATCTCTGAGATGAGCAGCATCCAAGTCCAATCCCACTCAGATTTGGATGAATCGGCATCGTCACTCTCATCAGACCACTGGCTTCAATCACTCTTCCCTTTCTTCCAAACATGGAAGAAAAACCATGGTCCAATATACATGTACTCTACTGGGATCAAGCAGCACCTTCATATAAGCAAACctgaattaataaaagagcTGAAGCTGGTAAGGTCACTAGATTTTGGTAGGCCTTCTCATCTGGCCAAGACATTGAAACCTCTGCTGGGTGGGGGCATCATGAGGGCTAATGGAACAGATTGGGCTTTCCAGAGGAATCTTATTGCTCCTGAGTTTTTCCATGCCAAGATTCAGAACATGGTGGGTTATGTGGAAGAATCTACAATGGCAACGATTCGAGCATGGGAGATGCGAATGAATGAAAATCAGAGCGTGGAGTTGGTGATTGATAAAGACTTTAAGGTTCTTAGCGCAGATGTCCTTTCAAGGGCTTGTTTTGGTAGCTCTTATGCtcaaggaaataaaatttttgaaataatagaCACAATGCAAACCGCATTAGCAAAGCCAAGTTTCATATTTGGATTTCTAGACCTGCGATTCCTTCCGACCAAGGCGAAcagagaaatattaaaatcacaaaaagaGGTGGAGACACTGATACTCAAGGTCATTAATGATCGTGAAGAAGAAAATCGAAAGATGGGTGCTGGTACAGGTGGTAATCAGAGCGGAAAGGACCTGTTGCAAGCAATCTTGGAAGGTGCTGCCACTGCTTTTGAGCACaattataatgaaatgaaGCATTTCATTGTGGCCAGCTGCAAGACTATATACTTTGCAGGTGCTGAGAGTATCTCTCTTGCAGCTTCTTGGACGATGATGCTACTTGCGTCACATCCTCAATGGCAACAACGTGTTCGATCTGAGATTCAAGACACCTTCGGCAATGTTTTATCTCCTCATTGCTTTGATGACATGGACAAATTCCGAAAGCTGAAAACACTGACAATGGTGATCCAAGAGAGTCTGCGCCTTTACCCACCTGGAATAACAATTGCAAGGCAAGCGTTGGTTGATACCAAGTTAGGGGAATTGGAGCTTCCAAAAGGCATTAACATGTGGGTTTTCATTCCTACATTGCACCGTGACCCTGACAACTGGGGACCAGATGCTAATGAATTCAAGCCAGAAAGGTTTGCCAATGGGGTTAATGAGGCCTGCAAATATCCCCAGCTTTACATGCCATTTGGTTTGGGGAGCCGAATTTGCTTAGGCCAAAACTTTGCCATGTTTCAACTCAAGATAATATTCTCCATTCTTTTGTCAAACTTTTCCTTCTCACTCTCTCCAAACTATCGCCATTCTCCTGTCTACAATATGTTGTTGAAACCAAAATATGGAATGAGAATCATTGCCAATAGAGTGGGAAGTGCAGAGGcata 1652 0.4031 MILYDLTIRGKTEREMEEVFWSVALVAISIVIVIAKLVCENVWLEPRRIRSVLEKQGIKGPKPSFLFGNISEMSSIQVQSHSDLDESASSLSSDHWLQSLFPFFQTWKKNHGPIYMYSTGIKQHLHISKPELIKELKLVRSLDFGRPSHLAKTLKPLLGGGIMRANGTDWAFQRNLIAPEFFHAKIQNMVGYVEESTMATIRAWEMRMNENQSVELVIDKDFKVLSADVLSRACFGSSYAQGNKIFEIIDTMQTALAKPSFIFGFLDLRFLPTKANREILKSQKEVETLILKVINDREEENRKMGAGTGGNQSGKDLLQAILEGAATAFEHNYNEMKHFIVASCKTIYFAGAESISLAASWTMMLLASHPQWQQRVRSEIQDTFGNVLSPHCFDDMDKFRKLKTLTMVIQESLRLYPPGITIARQALVDTKLGELELPKGINMWVFIPTLHRDPDNWGPDANEFKPERFANGVNEACKYPQLYMPFGLGSRICLGQNFAMFQLKIIFSILLSNFSFSLSPNYRHSPVYNMLLKPKYGMRIIANRVGSAEA 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00015 550 PRINTS E-class P450 group I signature 359 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS E-class P450 group I signature 493 516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS E-class P450 group I signature 108 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS E-class P450 group I signature 339 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS E-class P450 group I signature 225 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS E-class P450 group I signature 483 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 486 495 IPR017972 GO:0005506|GO:0016705
Bva01g00015 550 Gene3D Cytochrome P450 43 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 540 - -
Bva01g00015 550 SUPERFAMILY Cytochrome P450 95 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS P450 superfamily signature 350 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS P450 superfamily signature 493 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS P450 superfamily signature 484 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PRINTS P450 superfamily signature 407 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva01g00015 550 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 540 - -
Bva01g00015 550 Pfam Cytochrome P450 100 537 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00015 Bva-Chr1 110149 113160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00015 132 540 Cytochrome P450 AT5G24900 43.541 4.88e-128 379