Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00011 atggGCAATTGTGGTACCAGAGAGGAATCAGCTGTTGTCTCCAATGCTCAAGTCGAGCAGGTGCACAATTCTAGAAATGAGAAGAAACACAATCGATCAGTGTCAGATCTGAGCGACTCTTCAACCTCGCGTATCAACTTGGAGGATGCGAGGAAGAACACAGTTCTGTATACTCACGTCATTGCTTTTACATTGTACGAGCTTGAGACTATCACTAAGAGCTTTCGCTCCGACTATATCCTCGGCGAAGGTGGCTTCGGCACTGTCTATAAAGGTTACATTGATGAGAATGTGAGGGTTGGTCTCAAATCTCTCCCTGTTGCCGTTAAGGTTCTCAACAAGGAAGGCCTGCAGGGACATCGAGAATGGCTTACGGAAGTCAATTTTCTCGGGCAACTCAGGCATCCTAATCTTGTTAAGTTGATTGGGTACTGCTGCGAGGATGATCACAGATTACTCGTATATGAATTCATGTTCCGTGGAAGTCTGGAGAATCACCTATTCCGAAAGGTGACAGTCCCTTTATCATGGGCTGCAAGAATGATGATTGCCCTTGGAGCTGCCAAAGGGCTTGCTTTTCTCCACAATGCTGAAAGGCCTGTAATCTATCGGGACTTTAAAACATCTAATATCTTATTAGACTCTGACTATACAGCCAAGCTTTCTGATTTTGGACTGGCTAAAGCTGGACCACAAGGTGATGAAACACATGTATCCACCCGAGTAATGGGTACCTATGGTTATGCTGCCCCTGAATATGTGATGACTGGTCACTTGACAGCAAGGAGTGATGTGTATAGCTTTGGTGTTGTTCTTTTGGAGCTTTTAACAGGAAGGAAGTCTGTTGACAAGACACGACCAAGCAAAGAACAGAGCTTGGTAGATTGGGCCAGACCAAAGCTTAATGATAAGAGAAAGCTCCTACAAATAATAGATCCTAAATTGGAGAACCAATACTCTGTGAGGGCTGCACAGAAAGCATGTAGCTTGGCTTACTACTGTTTGAGTCAAAATCCCAAAGCACGGCCATTAATGAGTGACGTAGTTGAGACATTGGAACCCTTACAAAGTTGTAGTGATGGTAAAGGTGAAGTCTCGTCATTAGGAACAAACAATGGAGGTCGCAGCCCCTTTGCTATGAATGGAATCTCTGACTATAGGATGCGTCAGAGGTTTCCAAACAATGTTGGTCCAGGTGCTATTTGTCGGTCTCCAAACCCAAATTGCTCACCAGGTGCCCCTGCAGCATGCAGAGTCAGATG 1262 0.4493 MGNCGTREESAVVSNAQVEQVHNSRNEKKHNRSVSDLSDSSTSRINLEDARKNTVLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKVTVPLSWAARMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPSKEQSLVDWARPKLNDKRKLLQIIDPKLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCSDGKGEVSSLGTNNGGRSPFAMNGISDYRMRQRFPNNVGPGAICRSPNPNCSPGAPAACRVR 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00011 420 MobiDBLite consensus disorder prediction 1 40 - -
Bva01g00011 420 ProSiteProfiles Protein kinase domain profile. 75 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00011 420 Gene3D Transferase(Phosphotransferase) domain 1 158 367 - -
Bva01g00011 420 PANTHER OS01G0588500 PROTEIN-RELATED 18 407 - -
Bva01g00011 420 Gene3D Phosphorylase Kinase; domain 1 34 157 - -
Bva01g00011 420 Pfam Protein tyrosine and serine/threonine kinase 80 352 IPR001245 GO:0004672|GO:0006468
Bva01g00011 420 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL8-RELATED 18 407 - -
Bva01g00011 420 CDD STKc_IRAK 81 355 - -
Bva01g00011 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bva01g00011 420 ProSitePatterns Protein kinases ATP-binding region signature. 81 110 IPR017441 GO:0005524
Bva01g00011 420 SUPERFAMILY Protein kinase-like (PK-like) 53 353 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00011 Bva-Chr1 82134 86483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00011 63 361 Glycoside Hydrolase AT3G07070 53.974 4.92e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva01g00011 Pkinase 7.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00011 - - rcu:8283036 749.199