Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g2048 ATGAGGAACTTGGAGAAACTATCAAAATCAGATAGTAATGATGCTGGTTCTGGTGCCACTGCAGCCATCCCAACTGCAAATGTTTTGCAGCATGCAACGAACGCAGTAAATGGGCCACAGGAAAAGCCAGATCCTAGTAAACAAGATGAGATAAATTCTCAAAAGCCAGGGAATGCTGTCATGTTAGAGGCTCCAGAAAAGGATTTTGAGACTTCAGCAGCTTCTGTTAAACTGTGCACTCTATGCAATGTAGTGTGCAACAGTGAAACGGTCTATAATTCTCACCTTACTGGCCAGAAACATGCTGCTATGGTGAAGAAGCAAGCAGGGTCAACGATTAGTTGA 345 0.4348 MRNLEKLSKSDSNDAGSGATAAIPTANVLQHATNAVNGPQEKPDPSKQDEINSQKPGNAVMLEAPEKDFETSAASVKLCTLCNVVCNSETVYNSHLTGQKHAAMVKKQAGSTIS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g2048 114 Pfam Zinc-finger of C2H2 type 79 101 - -
Bisa12g2048 114 PANTHER ZINC FINGER PROTEIN 385B-LIKE 31 111 - -
Bisa12g2048 114 SUPERFAMILY beta-beta-alpha zinc fingers 71 108 IPR036236 -
Bisa12g2048 114 SMART ZnF_U1_5 74 108 IPR003604 GO:0003676|GO:0008270
Bisa12g2048 114 Gene3D Classic Zinc Finger 39 109 - -
Bisa12g2048 114 MobiDBLite consensus disorder prediction 1 56 - -
Bisa12g2048 114 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g2048 Bisa-ChrBisa12 49752832 49753176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g2048 34 114 C2H2 Transcription Factor Family AT5G61190 35.802 3.85e-08 48.1