Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g2043 ATGGTCCTTCTCTTTGCAATGTTCTTCTTCCTTTACCACTCTGTTTTCCCGCCCTGTACGTGCCTGACCACGGATACACAGGCTCTCCTTCAGTTCAAGACACACTTGAAGGACCCTTTGGATTGTTTGGGTTCTTGGAAAGAATCTGAGTCTCCATGTGAGTTTCATGGAGTTACTTGTGATCCATTTTCAGGGAAGGTCACAGGAATCTCACTGGAAAATGAGTCCCTCTCAGGGGATATTTTCCCCTCAATTTCTCTTCTCCAGAGCCTGCAAGTTTTGTCACTCCCATCAAATCTCATTTCTGGGAAGCTTCCATTTGAGATAAGCAATTGTGCCGACCTCAGAGTTCTGAACCTTACAGGGAATGAGATGGTTGGGACTATTCCAGACCTCTCTGCGCTGAGAAACCTTGAGGTTCTTGACCTTTCTGCCAACTACTTCTCCGGCAGCTTCCCGGGCTGGGTCGGAAATCTGACCGGTTTAATTTCACTGGGACTCGGTGAAAATGAATATATTGAGAGTGAAATTCCAGAGAGTCTTGGCAATCTGAGAAACTTGACTTGGCTTTATCTCGGGGGTTCACATTTGAGAGGGGAGATTCCAGAATCCATATATGAAATGCAGGCTTTGGAGACATTAGATATTTCAAGGAACAAGATTTCTGGCAAAATCTCCAAGTCGATTTTGAAGTTGAGAAATCTTTACAAGATTGAGCTTTTCTCAAATAATTTGACCGGACAAATCCCAGCTGAGCTGGCAAACCTGACCAAACTGCAAGAGATTGACATTTCTATGAACAATTTGTGTGGTAGGCTGCCAGAGGTGATTGGTAATATGAAGAACTTGGTAGTTTTTCAGCTATATGAAAACAATTTTTCTGGAGAACTTCCTGGTGGGTTTGCAGATATGGAACATCTTGTTGGGTTCTCAATCTATAGAAACAACTTCACTGGGATAATTCCAGAGAATTTTGGCCGGTTTTCGCCACTCGAGAGTATTGACATATCAGAGAATCAATTTTCAGGTGATTTCCCAAAGTTCTTGTGTAAAAAGGGCAAGTTGAAATTCTTGCTTGCTTTACAAAACAATTTCTCAGGTGAGTTACCTGAGTCTTATGTCACATGCAAATCTCTGGAGAGATTTAGGATCAGCCAGAACCGCTTGTCAGGACAAATCCCAAAGGAGCTTTGGGCACTTCCAAATGTGAAAATAATTGATTTGGCTGAAAATAATTTTGTTGGTGATATATCTCCAGAAATTGGGTTTTCATTCAGCTTAAGTCAATTGCTTCTGATGAAGAACAGGTTTTCAGGTAAGCTGCCACCAAAAATTGGGAAGTTAATGAATTTGGAGAAGCTACATTTGAGCAACAACAATTTCTCTGGCGAAATCCCACCTGAAATTGGAGCTCTAAAGCAGTTATCATCTTTGCATTTAGAAGAGAATTCATTAAGCGGGCCAATACCAGCACAACTGGGCAATTGTGTGAGGCTAGTAGACTTGAATCTTGCTTGGAATTCTCTAACCGGAAATATCCCCGAGTCCGTTTCGCTTATGAGCTCGTTGAACTCTCTTAACCTATCTGGAAACAAACTTACAGGTTCACTCCCAAAAGGTCTAGTGTCAATGAAACTAAGCTCAATTGATTTTTCCAGAAACCAACTTTCTGGGAGAATACCATCTGCTCTTCTAATTAGTGGTGGAGACAAAGCTTTTGTTGGAAACCAAGGACTTTGTATTGACGAAAACTCGAAAACTCTCATGAATTCTGAATTGAACATCTGTGCAAGAATACACGGTCAGAAAAATGTCTTTGCTGATAAAATTGTCTTACTTTGTATCATTGCTTCTGTCTTGGTTCTAGTTTTGGCTGGAATGCTGCTTGTGAGTTACGGAAGCTTCAAGCATGGTGAAGCCGACGTAGAGAAAAATTTACAAGGTCAAAAGGAAACAGATCCAAAATGGAAACTTGCATCTTTCCACCAAGTCGATATCGATGTCAATGAAATAAGTCATTTGGATGAAGATCATTTAATTGGAACTGGTGGTACTGGAAAGGTTTATAGAGTTGAACTGAGGAAAAATGGCGCCACTGTGGCTGTAAAGCAACTATGGAAAGGAGATGGTGTAAAAATTTTGGCTGCAGAGATGGAGATTTTGGGGAATATTAGGCACAGAAATATACTTAAGCTTTATGCTTGTTTTCTTAAACAAGGATCAAGCTTTTTGGTGCTGGAGTACATGCCAAATGGTAATCTCTTTCAAGCTCTCCACAGACAGATAAAAGGTGGGAAGCCAGAATTGGATTGGTACCAGAGGCATAAAATTGCACTGGGAACTGCAAAAGGAATTGCCTATTTACACCATGATTGTTCTCCACCTATTATTCACAGGGATATCAAATCCAGCAACATTTTGCTTGATGAAGATTATGAGCCGAAAATTGCTGATTTTGGTGTTGCAAAGTTTGCGGAAAAATCTGATAAGCAGTTGGGTTGTAGCTTTCTTGCTGGCACACATGGTTATATTGCTCCAGAGCTGGCTTATACACTTGAAGTTACTGAGAAGAGCGATGTATATAGCTTCGGAGTCGTGTTGTTAGAACTAGTTACTGGGAGGGAAGCCATTGATGAAGAATACGGAGAAGGCAAGGATATTGTGTACTGGGTGATGACTCATCTCAATGACCGTCAAAGTGTTGTCAACATTCTGGATCATAAAGTGGCATCTGACTCTGTTGAAGATGACATGATTAAGGTATTGATGATTGCTATCGATTGCACAACTAAGCTCCCATCTCTACGCCCTTCCATGAGAGATGTTGTCAAGATGCTTATCGATGTTGATTCTGGCACATTTCAACCTTCGGAATGTGATTTTCACAAAGATACCAAGGGTTTTATGTAG 2910 0.4096 MVLLFAMFFFLYHSVFPPCTCLTTDTQALLQFKTHLKDPLDCLGSWKESESPCEFHGVTCDPFSGKVTGISLENESLSGDIFPSISLLQSLQVLSLPSNLISGKLPFEISNCADLRVLNLTGNEMVGTIPDLSALRNLEVLDLSANYFSGSFPGWVGNLTGLISLGLGENEYIESEIPESLGNLRNLTWLYLGGSHLRGEIPESIYEMQALETLDISRNKISGKISKSILKLRNLYKIELFSNNLTGQIPAELANLTKLQEIDISMNNLCGRLPEVIGNMKNLVVFQLYENNFSGELPGGFADMEHLVGFSIYRNNFTGIIPENFGRFSPLESIDISENQFSGDFPKFLCKKGKLKFLLALQNNFSGELPESYVTCKSLERFRISQNRLSGQIPKELWALPNVKIIDLAENNFVGDISPEIGFSFSLSQLLLMKNRFSGKLPPKIGKLMNLEKLHLSNNNFSGEIPPEIGALKQLSSLHLEENSLSGPIPAQLGNCVRLVDLNLAWNSLTGNIPESVSLMSSLNSLNLSGNKLTGSLPKGLVSMKLSSIDFSRNQLSGRIPSALLISGGDKAFVGNQGLCIDENSKTLMNSELNICARIHGQKNVFADKIVLLCIIASVLVLVLAGMLLVSYGSFKHGEADVEKNLQGQKETDPKWKLASFHQVDIDVNEISHLDEDHLIGTGGTGKVYRVELRKNGATVAVKQLWKGDGVKILAAEMEILGNIRHRNILKLYACFLKQGSSFLVLEYMPNGNLFQALHRQIKGGKPELDWYQRHKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEPKIADFGVAKFAEKSDKQLGCSFLAGTHGYIAPELAYTLEVTEKSDVYSFGVVLLELVTGREAIDEEYGEGKDIVYWVMTHLNDRQSVVNILDHKVASDSVEDDMIKVLMIAIDCTTKLPSLRPSMRDVVKMLIDVDSGTFQPSECDFHKDTKGFM 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g2043 969 ProSitePatterns Protein kinases ATP-binding region signature. 680 703 IPR017441 GO:0005524
Bisa12g2043 969 Gene3D Ribonuclease Inhibitor 173 230 IPR032675 -
Bisa12g2043 969 SUPERFAMILY RNI-like 273 565 - -
Bisa12g2043 969 FunFam Leucine-rich receptor-like protein kinase family protein 664 748 - -
Bisa12g2043 969 Gene3D Ribonuclease Inhibitor 231 307 IPR032675 -
Bisa12g2043 969 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Bisa12g2043 969 FunFam Leucine-rich repeat receptor protein kinase EMS1 201 284 - -
Bisa12g2043 969 Pfam Leucine rich repeat 136 197 IPR001611 GO:0005515
Bisa12g2043 969 ProSiteProfiles Protein kinase domain profile. 674 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g2043 969 SUPERFAMILY L domain-like 49 357 - -
Bisa12g2043 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Bisa12g2043 969 CDD STKc_IRAK 680 946 - -
Bisa12g2043 969 Gene3D Phosphorylase Kinase; domain 1 673 752 - -
Bisa12g2043 969 SMART LRR_typ_2 520 544 IPR003591 -
Bisa12g2043 969 SMART LRR_typ_2 256 280 IPR003591 -
Bisa12g2043 969 SMART LRR_typ_2 184 208 IPR003591 -
Bisa12g2043 969 SMART LRR_typ_2 448 472 IPR003591 -
Bisa12g2043 969 SMART LRR_typ_2 135 158 IPR003591 -
Bisa12g2043 969 SMART LRR_typ_2 88 112 IPR003591 -
Bisa12g2043 969 Gene3D Ribonuclease Inhibitor 308 590 IPR032675 -
Bisa12g2043 969 FunFam leucine-rich repeat receptor-like protein kinase TDR 749 957 - -
Bisa12g2043 969 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 354 947 - -
Bisa12g2043 969 Pfam Protein kinase domain 676 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g2043 969 SMART serkin_6 674 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g2043 969 Gene3D Transferase(Phosphotransferase) domain 1 753 960 - -
Bisa12g2043 969 FunFam Receptor-like protein kinase HSL1 285 589 - -
Bisa12g2043 969 FunFam Probable inactive receptor kinase RLK902 22 180 - -
Bisa12g2043 969 Gene3D Ribonuclease Inhibitor 21 172 IPR032675 -
Bisa12g2043 969 SUPERFAMILY Protein kinase-like (PK-like) 667 946 IPR011009 -
Bisa12g2043 969 Pfam Leucine Rich Repeat 211 232 IPR001611 GO:0005515
Bisa12g2043 969 Pfam Leucine Rich Repeat 450 471 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g2043 Bisa-ChrBisa12 49428381 49432516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g2043 1 950 Receptor kinase-like Gene Family AT1G72180 57.829 0.0 1075
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa12g2043 Pkinase 2.4e-48 CL0016