Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g2035 ATGCAACCGACTTCTGCTGGTAGCAGCAGCGGCGGAGGTGGTGGCGGTTGCGGTGGCGGTGAGCAGGGTCGTGGTGGGCTTTCCCGGTTCCGTTCAACTCCAGCCACGTGGTTAGAAACACTGCTCAAGGAGGAAGACGAAGAAGACCCATTGGATACCACTGGGTGTTTCACTCAGCTGCTCGCTGCAGGTAGCGATAATTTGTCGAGAAATGCGGCGTTGTTCGATTCGCCGGGTGCTGACGGTGGCGATGTTGACGCTGCGTCGTCATCGAGTGGGGTTTTCCGGCGGAATAGTTCTCCGGCGGAGTTTTTCGTCAGAAATCCAGTAGAAGCCTCCGAAGCAGGGTACATCTCCAAGTATGGGGTTGTTCAATCCAATTACGACGTCGTTGCACAAGATATGGATGTTCCTTCCATGGCTAATAGTAATACTATCAGACAGAAAGTGCAGCATAGTGGTAGAGTACCGGACATGGATATAGAGAAAATGTTGAAGGATTCGGTACCTTGCAGAGTTCGGGCAAAGCGTGGCTATGCTACACATCCAAGGAGCATTGCTGAAAGGGTTAGGAGAACTCGGATAAGTGACCGCATAAGGAAGCTGCAAGAACTTGTGCCAAACATGGATAAGCAAACAAATACTGCAGATATGTTAGACGAGGCAGTAGCATACGTCAAGTCTCTACAGAAGCAAATTGAGGAACTCTCAGAGCACCAACGGAGATGTACATGCACGGTTCAAGAATAA 750 0.504 MQPTSAGSSSGGGGGGCGGGEQGRGGLSRFRSTPATWLETLLKEEDEEDPLDTTGCFTQLLAAGSDNLSRNAALFDSPGADGGDVDAASSSSGVFRRNSSPAEFFVRNPVEASEAGYISKYGVVQSNYDVVAQDMDVPSMANSNTIRQKVQHSGRVPDMDIEKMLKDSVPCRVRAKRGYATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKSLQKQIEELSEHQRRCTCTVQE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g2035 249 SMART finulus 185 235 IPR011598 GO:0046983
Bisa12g2035 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 229 IPR011598 GO:0046983
Bisa12g2035 249 Pfam Helix-loop-helix DNA-binding domain 184 230 IPR011598 GO:0046983
Bisa12g2035 249 Gene3D - 180 249 IPR036638 GO:0046983
Bisa12g2035 249 FunFam Transcription factor bHLH130 family 180 248 - -
Bisa12g2035 249 MobiDBLite consensus disorder prediction 1 30 - -
Bisa12g2035 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 245 IPR036638 GO:0046983
Bisa12g2035 249 Coils Coil 219 239 - -
Bisa12g2035 249 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g2035 Bisa-ChrBisa12 49153005 49169651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g2035 29 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 49.383 6.61e-58 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa12g2035 HLH 9.6e-10 No_clan