Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g2032 ATGGGACGTTCCCCTTGTTGTGAGAAAGAACACACAAACAAAGGTGCTTGGACCAAAGAGGAAGACCAACGCCTTATTGACCATATTCGTGTCCATGGCGAAGGCTCTTGGCGTTCTCTCCCCAAAGCTGCTGGATTGCTTAGATGCGGAAAGAGTTGTAGATTGAGGTGGATAAATTACCTTCGTCCTGATCTGAAACGTGGAAATTTCACTGAAGAAGAAGACGACCTCATCATTAAGCTCCATAGTTTACTCGGAAACAAATGGTCTCTGATTGCGGCGCGATTACCTGGTAGAACCGACAACGAGATCAAAAACTACTGGAACACTCACGTAAAGCGCAAACTCATCAGCCGCGGAATCAACCCACAAACGCACCGTCCTCTCGACGAAGCCACCGCCACCCTAAATTCCGCCGCGGAGTGGGATTTCCAGAACTCGCCGTCGACTTTTCCGGCGGGAGAAAACGACGTCGTTGTGAAGACGCAGCAGAGTGATGGTAGGTTCAACTGCATCAATTTCGGAACCGAGTTGAAGAGAGAGAAGTATGTTGAGGATTTGAACTACACGAGTAGTGGCACCACTACAGAGGAGGGACCGCCACTGCAGCGAGATTCGCCTCGTGGCGGCGAGCCAAATCTGGATCTCTCGATCGGTCTCGTACCGTTTCAGTCCGAGTCGACTCGTACGGCATTGGGGAACTCGGCCGAGTCGAAACTCGGATCGGTGCAGACGGCGGCGACTACGACGGTATGTCTGTGTTGGCAATTGGGTTCTCAGAGAAGCGGTGAAATGTGTAGGAACTGCTGCTACAACGCAAATAGCTTCAATAATAGATTTTGCAATCTTCTAAAATATTGA 861 0.5017 MGRSPCCEKEHTNKGAWTKEEDQRLIDHIRVHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVKRKLISRGINPQTHRPLDEATATLNSAAEWDFQNSPSTFPAGENDVVVKTQQSDGRFNCINFGTELKREKYVEDLNYTSSGTTTEEGPPLQRDSPRGGEPNLDLSIGLVPFQSESTRTALGNSAESKLGSVQTAATTTVCLCWQLGSQRSGEMCRNCCYNANSFNNRFCNLLKY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g2032 286 CDD SANT 69 112 IPR001005 -
Bisa12g2032 286 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa12g2032 286 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa12g2032 286 CDD SANT 16 61 IPR001005 -
Bisa12g2032 286 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa12g2032 286 Gene3D - 14 66 - -
Bisa12g2032 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa12g2032 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa12g2032 286 Gene3D - 69 136 - -
Bisa12g2032 286 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 146 - -
Bisa12g2032 286 FunFam MYB-related transcription factor 13 66 - -
Bisa12g2032 286 FunFam Myb transcription factor 68 137 - -
Bisa12g2032 286 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bisa12g2032 286 SMART sant 66 114 IPR001005 -
Bisa12g2032 286 SMART sant 13 63 IPR001005 -
Bisa12g2032 286 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa12g2032 286 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g2032 Bisa-ChrBisa12 49050593 49051694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g2032 1 239 MYB Transcription Factor Family AT4G09460 58.367 4.69e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g2032 Myb_DNA-binding 5.7e-14 CL0123