Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g2015 ATGTTAAATGAGAATGAGAATGTGAATAAGCATGATGTGTATATGTTGAAAGATCAAGTTGTGTTGAGAATTATAATTGAGACTTATATTGGCATGTCCGGGAAGTCGTGTCGCCTCCAGTGGTGCAATCAGCTCTTGCGGGAGCTGGAGCTCCGGACCTTCACGCCGAATGAGGATGAGATCATCATCCAGGCCCACTCTAAGTACAGCAACAAGTGGGCCACCGTAGCCAGGCTCCTAAACTGCCGTACGGACAACGCGATCAAGAACCATTGGAACTCGACCTTAAAGCAAAAGTACTCGTCGATGATCGCCGACGAATGCGCCGCCGTGGATAAGCAATCGGCGAAGAAATCGGTGGTCGGAGATCTCACCGTGTCGATACAGTCATTCTTGTCAAGCGGCCATTGTTACAGCTTGAGCAGTCCATATGGATCTGATGTGAGCGATTCAAGTCTCCCTGTAGTTTCATCTGCAATGGTGATTCGCCCGGTAAGCGAGAACTGCTGCAATCTTGTAGCCTTTCCAGCAAGCCAAGTCACAACTGAGTCCAATCCTCAAGCTCAAAAAGGAGCCATGCACTAA 585 0.4872 MLNENENVNKHDVYMLKDQVVLRIIIETYIGMSGKSCRLQWCNQLLRELELRTFTPNEDEIIIQAHSKYSNKWATVARLLNCRTDNAIKNHWNSTLKQKYSSMIADECAAVDKQSAKKSVVGDLTVSIQSFLSSGHCYSLSSPYGSDVSDSSLPVVSSAMVIRPVSENCCNLVAFPASQVTTESNPQAQKGAMH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g2015 194 CDD SANT 53 96 IPR001005 -
Bisa12g2015 194 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 33 127 - -
Bisa12g2015 194 SMART sant 50 98 IPR001005 -
Bisa12g2015 194 Gene3D - 52 122 - -
Bisa12g2015 194 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 100 IPR017930 -
Bisa12g2015 194 ProSiteProfiles Myb-like domain profile. 54 96 IPR001005 -
Bisa12g2015 194 Pfam Myb-like DNA-binding domain 53 95 IPR001005 -
Bisa12g2015 194 SUPERFAMILY Homeodomain-like 27 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g2015 Bisa-ChrBisa12 48516636 48519035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g2015 24 176 MYB Transcription Factor Family AT5G67300 46.203 1.27e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa12g2015 Myb_DNA-binding 1.7e-11 CL0123