Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g2013 ATGTCTGAAGACAGTTCAGACGACCCTTCTTGCTGCTCGAGATCCGATCATTTGGATTCAGCTTCAGCTGAACTCAAGCTTTACCGAGCCTTCATATTTTCTGTACCCGTCTTCTTCACTTTCATCTTGCTCTTTTTGTTCTACGTGTTCTACCTTCGACCGCGAAGGGTTGATTGGTCGTCTCTTAGGATGAGAGCATTTGCAGAGGGCAACAATGGCATCCCTCGGCCTGAATTGGGTTTGAAGAAAGAACTGAGGGAGATGCTGCCGATTATTGTATACCAAGAAAGCTTCTCTGTTAAAGATACACAATGCTCAGTATGCCTTTTAGACTACCAACCAGAGGATAGGCTTCAACAGATACCTGCATGTGGCCATACATTTCATATGAGTTGCATTGATCTTTGGCTTGCCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTACTAGCTTCTGCCAAATCACCAACTGGGACATCTGATACACAGAGACCACCGGATGATGAAGAAACACCAACTGTGCAATCCTCTGAATCAAGATCCACTCGGCATCCAGATACTAGTGTTGTCCAGAATAACTTGGGAGATGTTGCAAGCGGTGCTCACTGCATTGATGTTGAAAGAGAAAATGCAGAAAGCAGTTAG 648 0.4599 MSEDSSDDPSCCSRSDHLDSASAELKLYRAFIFSVPVFFTFILLFLFYVFYLRPRRVDWSSLRMRAFAEGNNGIPRPELGLKKELREMLPIIVYQESFSVKDTQCSVCLLDYQPEDRLQQIPACGHTFHMSCIDLWLANHSTCPLCRLSLLASAKSPTGTSDTQRPPDDEETPTVQSSESRSTRHPDTSVVQNNLGDVASGAHCIDVERENAESS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g2013 215 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Bisa12g2013 215 MobiDBLite consensus disorder prediction 156 202 - -
Bisa12g2013 215 Pfam Ring finger domain 104 147 IPR001841 -
Bisa12g2013 215 CDD RING-H2_EL5-like 104 147 - -
Bisa12g2013 215 MobiDBLite consensus disorder prediction 176 196 - -
Bisa12g2013 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 152 IPR013083 -
Bisa12g2013 215 PANTHER OS11G0150450 PROTEIN 47 182 - -
Bisa12g2013 215 SMART ring_2 105 146 IPR001841 -
Bisa12g2013 215 FunFam RING-H2 finger protein ATL7 71 152 - -
Bisa12g2013 215 SUPERFAMILY RING/U-box 89 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g2013 Bisa-ChrBisa12 48451788 48456641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g2013 20 151 C3H Transcription Factor Family AT4G10150 64.234 1.13e-63 196