Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1974 ATGAAAACCCTAACTCAAGCCTTGGCCAAGACTGCTGCGGTCATCGAGAAGAAGGTTCAGATCACCGTGCAGGAGGTCACCGGACCCAAGGCTCTCCAGGACTACGACCTCCTTGACCAGATCGCCTCCGCTGGGCCAGGTCTCGCATGGAGGCTCTACTCGGCCAGGCCCAAGGAGCCCTCGCGCCAGCTCCAGTACCCGCTTGTTTGTGTTTGGGTACTGGACAAGCGGGCACTGTCCGAGGCGCGAATGCGTGCTGGGCTCACCAAGGCGGCCGAAGATTCGTTTTTGGATTTGATTCGAGCCGACGCTGGTAAACTGGTTCGGTTGAGGCACCCCGGGGTGGTGCATGTAGTGCAGGCGTTGGATGAGAGCAAGAATGCAATGGCAATGGTGACCGAACCGTTGTTTGCATCGGTGGCTAATACTCTTGGGAATTTGGAGAATGTTGGTAATGTTCCGAAGGAGCTCAGGGGAATGGATATGGGACTCTTGGAGGTGAAGCATGGGTTACTTCAGATAGCAGAATCCTTGGATTTTCTCCATAACCATGCGCATCTTATTCATCGAGCTATATCACCTGAGAATATTCTTATAACCTTAAGTGGAGCTTGGAAACTTGGTGGATTTGGCTTTGCAATTTCAGCAGCTCAGACCTCTGGTGACTCGGCTAATCTTCAAGCTTTCCATTATGCTGAATATGATGTCGAGGACTCTGTTCTGCCACTTCAGCCATCACTTAATTACACAGCTCCTGAGCTGGTGAAGAGCACTGTGTCTTCAGCTGGGTGGTCTTCTGATATTTTCAGTTTTGGTTGTGTTGCTTACCATTTGATTGCTCGCAAGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGATACGTTCTCATCTATTCCACCGGAGTTGGTTCCTGATTTACAGAGGATGCTATCTCCGAATGAGTCTTCCAGGCCCAGTGCAATTGGTTTTACGGGCTCCCCATTTTTTCGGAATGACACTAGGTTGCGTGCTCTACGCTTCCTTGACCATATGCTTGAAAGGGATAACATGCAGAAGTCAGAATTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGACACCCGCGTATTGCGGTACAAGGTCCTTCCACCACTTTGTGCTGAACTTAGGAATGTGGTAATGCAGCCGCTGATTCTGCCTAGGGTGCTCACCATTGCGGAGTCTCAGGATAAAAGTGATTTTGAGCTATCAACATTTCCCGCCCTTGTTCCTGTCCTAAGTACTGCATCCGGTGAGACTCTGTTGCTACTTATGAAGAATGCAGAGCTTTTAGTAAACAAGACTAGTCATGAGCATTTAGTATCACATGTTCTTCCTATGTTTGTTCGGGCCTATGGTGATAATGATGCTCGTCTACAAGAAGAGGTTTTGAAGAAATCTATATCCCTCACTAAGCAACTTGATAACCAGCTGGTCAAAGAAGTGGTTTTGCCTCGTGTTCATGGCTTAGCACTTAAAACAACAGTTGCTGCGGTTAGAGTCAATGCTTTGTTGTGCTTAGGAGACATGGTTAGCCGGCTTGATAAACCTTCTGTCCTGGAAATCTTGCAAACTATTCAGCGCTGTACTGGTGTTGACCATTCTCCTCCTACCCTTATGTGTACCCTTGGTGTTGCAAACTCTGTTTTTAAGCGGTATGGAGTAGAATTCGTTGCTGAACACGTTCTTCCATTGATTATGCCCCTCCTGACAGCTCAACATTTGAATGTTCAGCAGTTTGCCAAATATATGTTCTTTGTCAAAGATATGCTCAGGAAGATAGAGGAGAAGCGAGGAGTCGTTGTGACTGATTCTGGAATCTCAGAGGCCAAACCATCATCTCCTTCGATTAATGGTGTTCGAACTGAATCCTCCAGTAAAACAAGCAGCACTGTTGCTCCATCAACGAAAAACAGCTCCTCTTGGGATGAAGATTGGGGTCCCGCAACAAAGGGAACTACCACCCCTTCCCACAGTTCTATTGACAAACCCAGTCAACCTGTGCTGGGAAGCCCAGTTGTTCAAATATCATCTTCACAACAACATTCATCCCCATCTGCCGTATCCAATCAGCAGACAACATGCCCACCGGCGGATTTAGAGTGGCCTCCTGCATCTTCTAGTAGTATGCCACGATTAGGTGATACTGAAAGCCACATGAAGTCGCCAGGAACCTCATCTGTGGCTGCTTTTGAAGATATTGATCCTTTTGCTGATTGGCCTCCACGTCCTAGTGGCTCATTAGGTGGATCTGGTCTTTCCAATAATGGTACTTTAGGACCGCCACTAAATAAATCTGGGCCTAGTTTAACGTCAAACGTTTCCAACAATATGAATTATCAAAACAGTTGGACTTTTAATTCCCCAAATTCTGCAGATCCAGTCAGTTTGAACCTTGGGAATGCTAGTTCGACCACTGGTAGTCTGCATGGTGGTCTAAATCCTCAGAATTCTCTAGGGTTCCTGAAACAGAATCAGGGACTTGCAGCATCCAATACTTCACACACGGACAAGCCAACAGATCTTGGATCCATCTTTGCTTTTGACAAGAATGAACTGGTTGCACCTAAATTAGCACCACCACCTTCAACTGCAACTACAGTGGGTAGAGGTAGAGGTAGAGGTAGAGGTAGAGGGAGGGGGCCTTCTCATAACAAGTCACGTTCTGATAAGCCACCCCTTTTGGATTTGTTGGAGTAG 2754 0.4677 MKTLTQALAKTAAVIEKKVQITVQEVTGPKALQDYDLLDQIASAGPGLAWRLYSARPKEPSRQLQYPLVCVWVLDKRALSEARMRAGLTKAAEDSFLDLIRADAGKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGNLENVGNVPKELRGMDMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENILITLSGAWKLGGFGFAISAAQTSGDSANLQAFHYAEYDVEDSVLPLQPSLNYTAPELVKSTVSSAGWSSDIFSFGCVAYHLIARKPLFDCHNNVKMYMNTLTYLSSDTFSSIPPELVPDLQRMLSPNESSRPSAIGFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDTRVLRYKVLPPLCAELRNVVMQPLILPRVLTIAESQDKSDFELSTFPALVPVLSTASGETLLLLMKNAELLVNKTSHEHLVSHVLPMFVRAYGDNDARLQEEVLKKSISLTKQLDNQLVKEVVLPRVHGLALKTTVAAVRVNALLCLGDMVSRLDKPSVLEILQTIQRCTGVDHSPPTLMCTLGVANSVFKRYGVEFVAEHVLPLIMPLLTAQHLNVQQFAKYMFFVKDMLRKIEEKRGVVVTDSGISEAKPSSPSINGVRTESSSKTSSTVAPSTKNSSSWDEDWGPATKGTTTPSHSSIDKPSQPVLGSPVVQISSSQQHSSPSAVSNQQTTCPPADLEWPPASSSSMPRLGDTESHMKSPGTSSVAAFEDIDPFADWPPRPSGSLGGSGLSNNGTLGPPLNKSGPSLTSNVSNNMNYQNSWTFNSPNSADPVSLNLGNASSTTGSLHGGLNPQNSLGFLKQNQGLAASNTSHTDKPTDLGSIFAFDKNELVAPKLAPPPSTATTVGRGRGRGRGRGRGPSHNKSRSDKPPLLDLLE 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1974 917 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 34 898 - -
Bisa12g1974 917 SUPERFAMILY ARM repeat 308 602 IPR016024 -
Bisa12g1974 917 MobiDBLite consensus disorder prediction 901 917 - -
Bisa12g1974 917 CDD PK_SCY1_like 41 342 - -
Bisa12g1974 917 ProSiteProfiles Protein kinase domain profile. 38 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1974 917 MobiDBLite consensus disorder prediction 624 794 - -
Bisa12g1974 917 Gene3D - 344 617 IPR011989 -
Bisa12g1974 917 MobiDBLite consensus disorder prediction 727 743 - -
Bisa12g1974 917 Pfam Protein kinase domain 106 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1974 917 SMART serkin_6 35 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1974 917 MobiDBLite consensus disorder prediction 766 794 - -
Bisa12g1974 917 Gene3D Transferase(Phosphotransferase) domain 1 146 343 - -
Bisa12g1974 917 MobiDBLite consensus disorder prediction 871 917 - -
Bisa12g1974 917 MobiDBLite consensus disorder prediction 815 838 - -
Bisa12g1974 917 MobiDBLite consensus disorder prediction 625 715 - -
Bisa12g1974 917 SUPERFAMILY Protein kinase-like (PK-like) 32 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1974 Bisa-ChrBisa12 46992892 47027088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1974 166 298 MAP Kinase Gene Family AT1G10210 30.147 1.18e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Bisa12g1974 Pkinase 1.4e-22 CL0016