Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1963 ATGCCCACAGCTACGACGCCGTTTTCTGGGCTGAAAATCATGGCAACAGAGGAGCCGAAGCCTTTGAATTATATTCCAGAGATCATTTTAAAGAAAAGAAAGAGCAACGAAGCATTGGCTTTGAGGAAAAAGCAGCAATTTGAGCAGAAGAAGTTTCAAACCAAGAAGAACAAGGACTGTATCAAAAAGCCTGAGGATTTCATCATAGAGTATCGCAACAAGGAGCTTGACCTTATTAGAATGAAACATCGAATCAAGAGGAAACGGCCAGCGCTGTTGATGCCACAGTCAGAGTTATTAATAATCATTCGAATACAGGGAAAAAAAGACATGCATCCAGAAATCCGAAAGGTCTTGTACAGCATGAGATTGACAAGAATATTCAGTGCTGTCTTTGTGAAGGCAACTGAGGGAATTATGGCGAAGCTGCAGAGGGTGGAACCATATGTTACCTATGGATATCCTAATCTCAAAAGCATAAAGGAGCTGATCTACAAAAAGGGACATGCAAAAATAGACAATCAGAAAGTCCCCTTAACGGACAATAATATTATTGAACAGGAATTAGGGAAGTATGGTATTGTCTGCATAGAAGACATGGTCCATGAAATTGTTAATGTTGGTCCACACTTTAAAGAAGTTGCCAATTTTTTGTGGCCCCTTGAACTCAACAAACCGGCAGAAGGCTTGCGAGGCTCTAAAACCTTATACAAGGATGGCGGAGACACAGGGAACCGCGAGGATCTCATAAACGAACTAATCAGTAAAATGAATTAG 777 0.4093 MPTATTPFSGLKIMATEEPKPLNYIPEIILKKRKSNEALALRKKQQFEQKKFQTKKNKDCIKKPEDFIIEYRNKELDLIRMKHRIKRKRPALLMPQSELLIIIRIQGKKDMHPEIRKVLYSMRLTRIFSAVFVKATEGIMAKLQRVEPYVTYGYPNLKSIKELIYKKGHAKIDNQKVPLTDNNIIEQELGKYGIVCIEDMVHEIVNVGPHFKEVANFLWPLELNKPAEGLRGSKTLYKDGGDTGNREDLINELISKMN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1963 258 Pfam Ribosomal protein L30p/L7e 100 150 IPR016082 -
Bisa12g1963 258 NCBIfam 60S ribosomal protein uL30 26 258 IPR005998 GO:0000463|GO:0003735|GO:0022625
Bisa12g1963 258 CDD Ribosomal_L7_archeal_euk 99 258 IPR035808 -
Bisa12g1963 258 FunFam 60S ribosomal protein L7 99 203 - -
Bisa12g1963 258 Pfam Ribosomal L30 N-terminal domain 26 88 IPR012988 -
Bisa12g1963 258 Gene3D - 203 258 IPR036919 -
Bisa12g1963 258 Gene3D - 99 202 IPR036919 -
Bisa12g1963 258 PANTHER 60S RIBOSOMAL PROTEIN L7 22 258 IPR039699 -
Bisa12g1963 258 SUPERFAMILY Ribosomal protein L30p/L7e 99 258 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1963 Bisa-ChrBisa12 46437468 46440241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1963 14 258 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 55.870 1.30e-89 264