Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1937 ATGAAGATTCCGCATCTAAACTACCTCACCCAGCATTCCTCTTGGGCAAGAGCATACACCCGCATGAGGATTCAACTTCCACATCCTGCAAAACTTTTCTTTTGCCAGGCAAAACATGATGGGTCATTAGACTTAAAAATGATGCCTCCAACCCTGTTAGCGGCAGAAAAGGAAGAAGCAAAGGCTGTATTAACCTTGTTTTTGAAGAAACAAGGCTTGAGCAATGCAGTTGCTGTAAGAACCATCAAGAAGTCAGATGATTTTATCGATCACCTTGTCTCCAGGCTTCATTCCAAGCATAAATCTTGGTACCTAGTAGGAAGAGAACTTACAACTCTTGAGATTAGGGATGCTCTAATTCCTTATCTTGAATCCCTCTTGGAAGAGCATGGAAACATTTTGATGGATGTAGTGGAAAACTATCCAAGCCCTCCAATCAAGGTTGAAAAACCAGCAGTGCCAATTTCTATTCCTGGGACTCCATTGTTGGAATCCAAGAAGACGAAAGCCATGTCTCGAGTGAGCGAGATCAACCCGGACGGCAAGCATCGCCCTCATATTGTCTATCTCTTGGAGCTGGGCATGGAGATTGAGCAGATCAAGAGTATCACTCGAAGATTTCCATCCTTTGCCTACTATAGCTTGGAGGGGAAAATTAAACCCATTGTTGAGTTTCTTCTAGAACTTGGGGTCCCAAAAGCAGACATCCCCATCATCATCACTAAAAGGCCTCAATTATGTGGAATCAGTCTCTCTGAGAATCTTAAACCCACCATGAAGTTCTTAGAAACTTTGGGTGTGGACAAGCAACAATGGGCAAAGGTGATATATCGATTTCCAGCACTTCTAACTTACAGCAGGCAGAAGGTGAGGGCAAGTATTGATTTTCTCTATGAAATAGGCCTCTCAGAGGAGAGCATAGGTAAGATCTTAACTCGCTTCCCCAGCATCATTAGTTACAGTGTAGATGACAAACTACGGCCCACGGCTAATTACTTCCGATCCTTAGGGGTTGATGTTGCCATTCTTCTATTTCGATGTCCACAAAATTTCGGTCTTAGCATTAACGCAAATCTAAAGCCTGTGACAGAGTTTTTCTTGGAGAGGGGATACACATTAGAGGAAGTTGGGACCATGATTTCAAGATATGGAGCATTGTATACTTTTAGCTTGACAGATAATTTGATTCCAAAGTGGGAATTCTTTCTGACCATGGATTACCCCAAACCGGAGCTGGTTAAGTTCCCTCAATATTTTGGTTACAGTTTAGAAGAGAGGATTAAACCAAGATATGCTCGTATGAAAGAGTCCAGAGTGAGGTTGCTGCTAAACCAGGTCTTGTCGCTGTCAAGCAGTAACTTCGAACAGGCCTTGAAAAAGAAAATTGAAAAAATGCAGTTTGATCAGGATTCTAGTTGTAGCAATAAAGATGTTCAACCAGAGAAGGGGGAATGA 1455 0.4241 MKIPHLNYLTQHSSWARAYTRMRIQLPHPAKLFFCQAKHDGSLDLKMMPPTLLAAEKEEAKAVLTLFLKKQGLSNAVAVRTIKKSDDFIDHLVSRLHSKHKSWYLVGRELTTLEIRDALIPYLESLLEEHGNILMDVVENYPSPPIKVEKPAVPISIPGTPLLESKKTKAMSRVSEINPDGKHRPHIVYLLELGMEIEQIKSITRRFPSFAYYSLEGKIKPIVEFLLELGVPKADIPIIITKRPQLCGISLSENLKPTMKFLETLGVDKQQWAKVIYRFPALLTYSRQKVRASIDFLYEIGLSEESIGKILTRFPSIISYSVDDKLRPTANYFRSLGVDVAILLFRCPQNFGLSINANLKPVTEFFLERGYTLEEVGTMISRYGALYTFSLTDNLIPKWEFFLTMDYPKPELVKFPQYFGYSLEERIKPRYARMKESRVRLLLNQVLSLSSSNFEQALKKKIEKMQFDQDSSCSNKDVQPEKGE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1937 484 Gene3D Transcription termination factor 3, mitochondrial 239 466 IPR038538 -
Bisa12g1937 484 Pfam mTERF 162 298 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 Pfam mTERF 296 455 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 Pfam mTERF 194 368 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 SMART mt_12 308 339 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 SMART mt_12 273 303 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 SMART mt_12 377 408 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Bisa12g1937 484 FunFam Transcription termination factor MTERF5 chloroplastic 244 464 - -
Bisa12g1937 484 PANTHER CGI-12 PROTEIN-RELATED 163 459 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1937 Bisa-ChrBisa12 45473877 45476318 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bisa12g1937 mTERF 7.2e-20 No_clan