Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1934 ATGACGTCAGTGGCTCCTTCCGTTGAAGCCCAGCATAATTCTGAATTATCAGCGCTGGCTCCTCCAAAAGTTAGCAAAGAGGAAACTAATTCGGTTAATTCTCCCCAGAATGACTTCATCTTCAGGTCAAAATTACCAGACATACCCCTCTCCAACCACCTTCCCCTCCACGCCTTCTGCTTCGAGAAACTCCCTAAATTCGCCGACCGCCAATGCCTCATCATCGGCTCCACCGGTAGGATCTACACCTACGCCGAAACGCACCTAATCTCGCGGAAGGTCGCCACCGGATTGTCCAATCTCGGGATCAAGAAAGGCGATGTTATCATGATCTTGCTCCAGAACTCCGCTGAATTCGTGTTCTCTTTCATGGCCGCCTCCATGATCGGCGCCGTCGCCACCACTGCCAACCCGTTCTACACCGCCGCGGAGGTCTCCAAGCAGCTCAAGGTCTCCAAAACCAAGCTCGTCATCACGCAATCAATGTACGTCGGCAAGATCCGCGAACACGAGGACACAGCCGGAGACGGCGAGGAGATTCAGGTGATCACCATCGACGACCCGCCGGAGAAATGCCTGCATTTCTCGGTCTTATCGGAAGCTGACGAGAGCGAGCTGCAGGAGGTGGACATCGATCCGGAAGATCCGATGGCGCTGCCGTTCTCCTCCGGCACCACCGGGCTGCCGAAGGGCGTGATTCTGACGCACAGGAGTTTAACCTCCAGCGTGTGTCAGCAAGTGGACGGAGAGAATCCGAATCTGTACCTGAGGCCAGAGGACGTGCTGTTGTGCGTGCTTCCGTTGTTTCACATATTTTCGCTCAACAGCGTGCTGTTGAATGCGCTGAGGTCGGGGAGTGCGGTGTTGCTAATGCAGAAGTTCGAGATTGGGGCGTTGTTGGAGTTGACGCAGCGGCACAAGGTGTCGGTGGCGATGGTGGTGCCGCCGCTGGTTCTGGCGCTGACGAAGAATCCGATGGCGAAGGACTTTGATCTGAGCTCTATAAGACTGGTGCTCTCAGGGGCAGCCCCGCTGGGGAAGGAGCTGGAGGAGGCTCTGAGCAGCAGGTTGCCTCAGGCAATTCTGGGACAGGGATACGGAATGACGGAGGCAGGGCCGGTTCTCGCGATGACCCTGGGGTTCGCAAAGGAGGCATTCCCAACGAAGTCAGGGTCATGTGGCACTGTGGTCCGAAACTCAGAGCTCAAAGTGGTTGACCCTGAAACCGGTTGCTCCCTTGGCTATAACCAACCCGGTGAGCTTTACATCCGAGGCCAACAAATCATGAAAGGATATCTGAATGATGAGAAGGCCACAGCGGAAACACTTGATGCAGAGGGTTGGCTTCACACAGGTGACATTGGCTACGTAGATGACGACGACGAGATATTCATTGTTGATAGGGTTAAGGAACTCATCAAATTTAAAGGCTTCCAGGTGCCACCAGCTGAACTTGAAGACCTTCTTATAAGTCACCCTTCCATTGCAGACGCAGCTGTTGTCCCGCAAAAGGATGTCGTTGCTGGTGAAGTTCCAGTTGCTTTCGTCGTCAGGTCAAATGGCTTTGATCTTACTGAGGAAGCTGTAAAGGAATTCATAGCTAAACAGGTAGTGTTTTACAAAAGACTACACAAGGTGTACTTTGTTCATGCAATTCCAAGGTCTCCATCTGGAAAGATATTAAGAAAGGATCTCAGAGCAAAGCTAGAGAACGCCCCCGAAACGGCTTGA 1731 0.5315 MTSVAPSVEAQHNSELSALAPPKVSKEETNSVNSPQNDFIFRSKLPDIPLSNHLPLHAFCFEKLPKFADRQCLIIGSTGRIYTYAETHLISRKVATGLSNLGIKKGDVIMILLQNSAEFVFSFMAASMIGAVATTANPFYTAAEVSKQLKVSKTKLVITQSMYVGKIREHEDTAGDGEEIQVITIDDPPEKCLHFSVLSEADESELQEVDIDPEDPMALPFSSGTTGLPKGVILTHRSLTSSVCQQVDGENPNLYLRPEDVLLCVLPLFHIFSLNSVLLNALRSGSAVLLMQKFEIGALLELTQRHKVSVAMVVPPLVLALTKNPMAKDFDLSSIRLVLSGAAPLGKELEEALSSRLPQAILGQGYGMTEAGPVLAMTLGFAKEAFPTKSGSCGTVVRNSELKVVDPETGCSLGYNQPGELYIRGQQIMKGYLNDEKATAETLDAEGWLHTGDIGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEDLLISHPSIADAAVVPQKDVVAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPRSPSGKILRKDLRAKLENAPETA 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1934 576 FunFam 4-coumarate--CoA ligase 2 471 572 - -
Bisa12g1934 576 ProSitePatterns Putative AMP-binding domain signature. 219 230 IPR020845 -
Bisa12g1934 576 FunFam Long-chain-fatty-acid--CoA ligase FadD 42 470 - -
Bisa12g1934 576 Pfam AMP-binding enzyme C-terminal domain 484 559 IPR025110 -
Bisa12g1934 576 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 36 567 - -
Bisa12g1934 576 Gene3D - 470 572 IPR045851 -
Bisa12g1934 576 Gene3D - 31 469 IPR042099 -
Bisa12g1934 576 Pfam AMP-binding enzyme 66 475 IPR000873 -
Bisa12g1934 576 SUPERFAMILY Acetyl-CoA synthetase-like 32 571 - -
Bisa12g1934 576 MobiDBLite consensus disorder prediction 1 35 - -
Bisa12g1934 576 CDD 4CL 50 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1934 Bisa-ChrBisa12 45236903 45243190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1934 17 482 Monolignol Biosynthesis Gene Families AT1G65060 68.908 0.0 659