Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa12g1928 | ATGTGGAAGAAGAGGAAGAAGTGCAAAGGTCTAATCCAATCTGATCATCCTTCAATTCCCTTGCTCATTAGTTTGAGGCTGAGAGAGGAAATCAAGCAAAAACAAGCAGAATATATTAACATGGAATTGAAAATCCTCCGAGCAATATTGCTTCTTTCGGGATTCTTACTGTCAGCTCAAATTCATCTCGTCTTCTCCTTCACTGATCCCCAAGATGTTTCTGTACTGAAATCTTTAAAGGATATATGGGAAAACACACCACCCAGCTGGGACAAATCAGATGACCCCTGTGGAGCACCTTGGGATGGAGTCACCTGCAACAGATCAAGAATCACTTCATTGGGGTTGTCAACCATGGGCCTCAGAGGTAAACTAAGTGGAGACATTGGGGGACTCACTGAATTGAGATCCTTGGACTTATCATTCAACAGAGGTTTGACAGGCCCCCTGTCTCCGCAATTAGGAGAGCTAAAAAAGCTGAATATATTGATTTTGGCTGGATGCAGCTTCAGTGGGAAAATTCCAGATCAATTGGGAGATCTCTCGGATCTATCATTTTTGGCATTAAATTCAAACAATTTCTCTGGACAAATACCTGCGTCACTGGGGAAACTTTCCAAACTGTATTGGTTGGACTTGGCAGACAATCAGTTGTCTGGGCCTATCCCTGTTTCTACTTCCACCACTCCTGGATTGGACCTCCTCCTCAAGGCTAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGATCCATTCCATCCAAGCTTTTCAATTCCGAGATGGTACTCATACACGTGTTATTTGATGGAAATCGTTTAACGGGGACTATACCATATACACTGGGACTAGTTCAGACCCTTGAAGTGCTTCGACTAGATAGAAATTTATTGACCGGGGAGGTCCCACCAAATCTCAGCAACCTTACTAACATCAATGAATTGAATCTAGCGCATAATAGTTTGACAGGCCCTTTGCCGGACTTGAGTCTCATGGATACCCTCAATTACGTGGATCTCAGCAACAATACTTTTTATCCTTCTGAAGCTCCATCTTGGTTTTCAACTTTACCATCACTTACCACTCTAATCATGGAGTTTGGATCACTTGAAGGCCCTCTCCCATCAAAACTCTTCAGCATTCCCCAAATACAGCAAGTGAAACTAAGGCGCAATGCATTGAACAGTACTTTGGATATGGGTGATAGTATTAGCCCCCAATTGCAGCTTGTGGATTTACAGGACAACCATATTACCTCTGTAACGCTCAGTTCTGGCTACAAAAACACATTGATTCTGATAGGGAATCCAGTGTGCGTGGTGGCTCTGTCCAACACAAATTACTGCCAGCCTGAGCAACAGCCCAAAAAGCCCTACTCGACCAGCCTGGCCAATTGCGGAACCAAGTCTTGCCCTCTCGATCAGAAGCTGAGCCCTCAGAGCTGCGAATGTGCGTATCCCTACGAGGGCATCCTCTACTTCAGAGCACCCCTCTTCAGAGACCTCTCCAACCTCAACACATTTCACTCTCTGGAAATGAGCCTGTGGGTGAAGCTGGGTCTCACCCCTGGCTCCGTCTCTCTGCAGAACCCATTCTTCAACAGCGACGACTATCTTCAGCTGCAGCTCGCACTCTTCCCCCCAATAGCATCGCACTTCAACAGGTCAGATGTCCAGAGAATTGGGTTCCAATTGAGCAATCAGACTTACAAGCCCCCACCCGAGTTCGGACCCTATTACTTCATCGCTTTTCCTTATGCTTTCCCAGATTCCCAAGGCGCAAACTCACTGAGCAAGGCTGTTGTGATTGCAATAGCAAGTGGGTGCTCATTTCTAGTTTTGAGTCTCATAGGGTTGGGAATTTATGCCATTCTGCAAAAGAAGCGCGCGGAGAAAGCCATCGGACTAAGTAGACCTTTTGCGTCGTGGACACCAAGTGGGAAGGATAGTGGAGGAGCACCACAACTAAAGGGAGCAAGATGGTTTTCTTACGATGAACTCAAAAAGTGCACCAATCATTTCTCCCACTCCAATGAATTGGGATTTGGAGGCTATGGCAAGGTTTACAAAGGGGTTCTCCCCGATGGACAAATGGTTGCAATAAAACGAGCTCAACAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAGATTGAGTTGCTTTCACGAGTTCACCACAAGAATCTTGTTGCTCTTGTTGGCTTCTGCTTTGAGCAAGGGGAACAGATGTTAGTTTATGAATTTATGCCCAATGGATCTCTTAGAGAGTGCTTATCTGGGAAATGTGGCATTCATGTTGACTGGAAGAGAAGGCTCCGAATTGCTCTCGGGTCAGCAAGAGGACTTGCTTACTTGCATGAACTGGCAAACCCTCCCATAATCCACAGAGATGTGAAGTCCACTAATATCTTGCTTGATGAGAATTTGACAGCAAAGGTTGCGGATTTTGGCTTATCCAAGCTCGTCTCCGACAGTGGGAAAGGTCATGTTTCAACTCAGGTCAAAGGCACATTGGGTTATTTGGATCCTGAATATTACATGACCCAACAACTTACAGAGAAGAGCGATGTGTACAGTTTTGGGGTGGTTTTGCTTGAACTGATAACAGCAAGGCAACCTATTGAGAAAGGGAAATACATTGTGCGTGAAGTGAGATCGTTGGTGACTAAGAACAAGGAGGAAGAGTATTATGGGTTATGGGACCTCATGGATCCAATGGTTAGAAACACTTGTAACGTTGTTGGGTTTGGAAGATTCCTGGACCTCACAATGCAATGTGTGGAGGAATCAGCTGGGGATCGTCCTACAATGAGTGAAGTTGTGAAAGCACTTGAGATCATCTTACAGAACGATGGAATGAACACAAATTCCACTTCTGCTTCCTCATCTGCCACAGACTTTGGAGTTTCTAAAGGTGCCATCAGACATCCTTATATTGATGCTTTCACCAAAAAGGACAGTAGTGAAAGCAATGCCTTTGACTATAGTGGGGGCTACACACTTTCAGCAAAAATTGAACCCAAATAG | 3027 | 0.4506 | MWKKRKKCKGLIQSDHPSIPLLISLRLREEIKQKQAEYINMELKILRAILLLSGFLLSAQIHLVFSFTDPQDVSVLKSLKDIWENTPPSWDKSDDPCGAPWDGVTCNRSRITSLGLSTMGLRGKLSGDIGGLTELRSLDLSFNRGLTGPLSPQLGELKKLNILILAGCSFSGKIPDQLGDLSDLSFLALNSNNFSGQIPASLGKLSKLYWLDLADNQLSGPIPVSTSTTPGLDLLLKAKHFHFNKNQLSGSIPSKLFNSEMVLIHVLFDGNRLTGTIPYTLGLVQTLEVLRLDRNLLTGEVPPNLSNLTNINELNLAHNSLTGPLPDLSLMDTLNYVDLSNNTFYPSEAPSWFSTLPSLTTLIMEFGSLEGPLPSKLFSIPQIQQVKLRRNALNSTLDMGDSISPQLQLVDLQDNHITSVTLSSGYKNTLILIGNPVCVVALSNTNYCQPEQQPKKPYSTSLANCGTKSCPLDQKLSPQSCECAYPYEGILYFRAPLFRDLSNLNTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQLQLALFPPIASHFNRSDVQRIGFQLSNQTYKPPPEFGPYYFIAFPYAFPDSQGANSLSKAVVIAIASGCSFLVLSLIGLGIYAILQKKRAEKAIGLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTNHFSHSNELGFGGYGKVYKGVLPDGQMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEFMPNGSLRECLSGKCGIHVDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVLLELITARQPIEKGKYIVREVRSLVTKNKEEEYYGLWDLMDPMVRNTCNVVGFGRFLDLTMQCVEESAGDRPTMSEVVKALEIILQNDGMNTNSTSASSSATDFGVSKGAIRHPYIDAFTKKDSSESNAFDYSGGYTLSAKIEPK | 1008 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa12g1928 | 1008 | FunFam | Predicted protein | 230 | 449 | - | - | |
| Bisa12g1928 | 1008 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 77 | 948 | - | - | |
| Bisa12g1928 | 1008 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 749 | 961 | - | - | |
| Bisa12g1928 | 1008 | ProSiteProfiles | Protein kinase domain profile. | 673 | 948 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa12g1928 | 1008 | Gene3D | Phosphorylase Kinase; domain 1 | 647 | 748 | - | - | |
| Bisa12g1928 | 1008 | Gene3D | Ribonuclease Inhibitor | 327 | 467 | IPR032675 | - | |
| Bisa12g1928 | 1008 | SUPERFAMILY | Protein kinase-like (PK-like) | 658 | 957 | IPR011009 | - | |
| Bisa12g1928 | 1008 | Gene3D | Transferase(Phosphotransferase) domain 1 | 749 | 969 | - | - | |
| Bisa12g1928 | 1008 | Pfam | Leucine rich repeat N-terminal domain | 70 | 107 | IPR013210 | - | |
| Bisa12g1928 | 1008 | FunFam | Leucine-rich repeat family protein | 71 | 227 | - | - | |
| Bisa12g1928 | 1008 | Gene3D | Ribonuclease Inhibitor | 71 | 232 | IPR032675 | - | |
| Bisa12g1928 | 1008 | Coils | Coil | 24 | 44 | - | - | |
| Bisa12g1928 | 1008 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 793 | 805 | IPR008271 | GO:0004672|GO:0006468 | |
| Bisa12g1928 | 1008 | SUPERFAMILY | L domain-like | 76 | 438 | - | - | |
| Bisa12g1928 | 1008 | SMART | serkin_6 | 673 | 947 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bisa12g1928 | 1008 | CDD | STKc_IRAK | 679 | 947 | - | - | |
| Bisa12g1928 | 1008 | ProSitePatterns | Protein kinases ATP-binding region signature. | 679 | 701 | IPR017441 | GO:0005524 | |
| Bisa12g1928 | 1008 | FunFam | Leucine-rich repeat protein kinase family protein | 641 | 748 | - | - | |
| Bisa12g1928 | 1008 | Pfam | Protein tyrosine and serine/threonine kinase | 676 | 944 | IPR001245 | GO:0004672|GO:0006468 | |
| Bisa12g1928 | 1008 | Gene3D | Ribonuclease Inhibitor | 239 | 326 | IPR032675 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa12g1928 | Bisa-ChrBisa12 | 45035084 | 45055809 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa12g1928 | 50 | 1008 | Receptor kinase-like Gene Family | AT1G79620 | 71.544 | 0.0 | 1435 |
Transcription factors information