Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1926 ATGGCACTCGGCGCTGCTGAGCCCCGTTCTTCTTCTTCCTCCGATTCAACCCCGCGATGGGAATACCGGGTTTTCTTGAGTTTCAGAGGGGAAGACACACGCAGGGGATTTACCGATCATTTGTATGCTTCATTGCAACGAAGGGGAATTTCAACTTTCAGGGACGACCAAGAATTAGAGAGAGGGGAAGTTATTTCATCGGAACTCCTCAAAGCAATTGAAGGGTCTATGTGTGCTATTATCGTGCTCTCACCAAACTATGCTTCTTCCACATGGTGTTTGGATGAGCTCCGAAATATTGTTGAGTGCAAGAAAAATTTGGGGCAATTGGTTTTTCCAATCTTCTACGGAGTGGATCCCAGTGATGTAAGACACCAAAGGGGACTCTTCGCAGAAGCTTTCAGGAAACATGAAGAAAGATTTCAGTGTAACGAAGAGAAGGTGCGAGGATGGAGAGATGCCTTAAAAGAAGTTGCTAATCTCTCTGGTTGGGACTCCAGGGACCGGCTTGAAGCAGAACTCATTGAAAGCATTGTTGAAGACATACAAAGAAAATTGCTACTAAAATTGCCATGTTGCATAGATAACCTGGTTGGGATTGATTCAAGAGTGGAGGAAGTGTACTCTCTACTCGGTATGGGGTCAAATGATGTTTGCTTTATAGGCATTTGGGGTATGGGTGGTGTTGGTAAAACAACTCTTGCTAGAGTAGTCTATGAAAGAATCAGAGATGAATTTAAGGTTAGTTGCTTTCTTGAAAATGTTAGAGAGCATTCTGAGACAAATGATATTGCATGTTTCTTCAAAGATGTGGATAAAAATCAAGTAATAGAAATATGGGAAAATTGTGGGCTGTGTCCTGGAATTGGGATTGAAATTCTGATTGAAAAATCTCTGGTCACACTGTCATCGAATAAGTTGTCAATGCATGATTTGCTCCAGCAAATGGGCAGGAATATTGTTTTTGAGGAATTTCCCTGTCATCCCGGGAGACGTAGTAGATTGTGGTCTCAAAAAGACATTGATCATGTATTGGGACGAAATAAGCTGTCAAAGCTGAAATGTCTTTTCTTAAAATATTGCCGGATGCTGCAATCTTTGCCTGAGCTTCCGTGGGCTATTAAACTATTATACGCGTGCAATTGTACTGCACTTGAAACTTCCAGAATTGATCCGTCAAGGCCGTGCAATCTCCTTGCAGAAATCAACCAATCAAGTTTCTCTGGAAATGACTACGACGGAATGGATCCATTATCGGCAATTAGAAGATTTCTTCAGGAAATGCCTTTTCCAAAGCCACGATTTGACATGGTTATCCCAGGGAGTGAAATCCCACCATGGTTTGACCATCAAATTTCTCGTTTCTTTGTAAGTGCAGACCTTCATCATAACTGGCCTTCGAGAGAGTGGGTGGGATTTGCATTGTGTTTTGTGTTGGTAAATTATGTGGAACCTGAGGTGTGCAAACATGAATTATTCTGCTATTTTGAGGAACGTGGATCTAGAAAAGCTCCATCTCCCATTTTCTACTGGGATGTGCCTTATCTGGAGTCATATCAACCTCACCTTTATATTGTCTACTTGTCTGGTGATCAAGTTGAAGTGAGTGAGTCCAGTCACATTGAATTTACACTCAAACGAGAATGCTATTGTTGTTATGGGTTGGAAGTAATCAAGAGTGGGTGTCGTCTGGTGTACAAGGAAGATGTTGAAGACTGGAAGAAAAATGGAAATCATCAGTTGCCATGGAGAATTTGGACTTAA 1764 0.4178 MALGAAEPRSSSSSDSTPRWEYRVFLSFRGEDTRRGFTDHLYASLQRRGISTFRDDQELERGEVISSELLKAIEGSMCAIIVLSPNYASSTWCLDELRNIVECKKNLGQLVFPIFYGVDPSDVRHQRGLFAEAFRKHEERFQCNEEKVRGWRDALKEVANLSGWDSRDRLEAELIESIVEDIQRKLLLKLPCCIDNLVGIDSRVEEVYSLLGMGSNDVCFIGIWGMGGVGKTTLARVVYERIRDEFKVSCFLENVREHSETNDIACFFKDVDKNQVIEIWENCGLCPGIGIEILIEKSLVTLSSNKLSMHDLLQQMGRNIVFEEFPCHPGRRSRLWSQKDIDHVLGRNKLSKLKCLFLKYCRMLQSLPELPWAIKLLYACNCTALETSRIDPSRPCNLLAEINQSSFSGNDYDGMDPLSAIRRFLQEMPFPKPRFDMVIPGSEIPPWFDHQISRFFVSADLHHNWPSREWVGFALCFVLVNYVEPEVCKHELFCYFEERGSRKAPSPIFYWDVPYLESYQPHLYIVYLSGDQVEVSESSHIEFTLKRECYCCYGLEVIKSGCRLVYKEDVEDWKKNGNHQLPWRIWT 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1926 587 Pfam NB-ARC domain 203 251 IPR002182 GO:0043531
Bisa12g1926 587 ProSiteProfiles TIR domain profile. 20 186 IPR000157 GO:0007165
Bisa12g1926 587 SMART till_3 21 161 IPR000157 GO:0007165
Bisa12g1926 587 Gene3D - 19 186 IPR035897 -
Bisa12g1926 587 Pfam TIR domain 22 188 IPR000157 GO:0007165
Bisa12g1926 587 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 266 IPR027417 -
Bisa12g1926 587 SUPERFAMILY "Winged helix" DNA-binding domain 263 345 IPR036390 -
Bisa12g1926 587 Gene3D - 187 315 IPR027417 -
Bisa12g1926 587 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 164 IPR035897 -
Bisa12g1926 587 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 188 - -
Bisa12g1926 587 Pfam C-JID domain 439 571 IPR045344 -
Bisa12g1926 587 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 261 380 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1926 Bisa-ChrBisa12 45024809 45030601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1926 246 358 WRKY Transcription Factor Family AT4G12020 37.391 1.89e-13 72.0