Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1900 ATGGCTCTTGTCCTTCATGCAGGGAGCACAAACAAAAATGCTTTCAAAGCTCTCATTGCTGCAGAGTACTCTGGTGTTAAAGTTGAGTTGGTGAAGAACTTTGAGATGGGTGTATCCAATAAAACTCCTCAGTTTCTAGAGATGAACCCTATTGGAAAGGTTCCTGTGCTAGAAACACCTGATGGCCCTATATTTGAAAGCAATGCCATCGCAAGATATGTTGCTCGCTTAAAGGCTGATAATCCTCTATATGGCTTGATCTTGATTGAATATGCTCATATTGAGCAGTGGATTGATTTTTCAACACTGGAGATAGATGCCAATATCTTGCGATGGTTTGTACCTCGTGCTGGATTTTCTGTGTACCTTCCTCCAGCAGAGGAAGCGGCAATTTCTTCATTAAAGAGGGCACTAGATGCTTTGAACACACATCTTGCTTGCAACACGTACCTTGTTGGACACCATGTTACCTTGGCTGATATCATTTTAACATGTAATTTAAGTTTGGGATTTAGCCGAGTAATGACCAAGAAATTTACTTCTGAGTTCCCACATGTTGAGAGAGACTGGCGAGGAAGAAGAGGCACCCAAGCCCAAGCCAAAGAATCCTCTTGA 615 0.4228 MALVLHAGSTNKNAFKALIAAEYSGVKVELVKNFEMGVSNKTPQFLEMNPIGKVPVLETPDGPIFESNAIARYVARLKADNPLYGLILIEYAHIEQWIDFSTLEIDANILRWFVPRAGFSVYLPPAEEAAISSLKRALDALNTHLACNTYLVGHHVTLADIILTCNLSLGFSRVMTKKFTSEFPHVERDWRGRRGTQAQAKESS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1900 204 SUPERFAMILY Thioredoxin-like 2 84 IPR036249 -
Bisa12g1900 204 SFLD Glutathione Transferase (cytosolic) 4 188 IPR040079 -
Bisa12g1900 204 FunFam Elongation factor 1B gamma 1 74 - -
Bisa12g1900 204 SFLD Main (cytGST) 4 188 - -
Bisa12g1900 204 CDD GST_C_EF1Bgamma_like 90 188 - -
Bisa12g1900 204 Gene3D - 80 202 - -
Bisa12g1900 204 Pfam Glutathione S-transferase, C-terminal domain 129 188 IPR004046 -
Bisa12g1900 204 Gene3D Glutaredoxin 1 74 - -
Bisa12g1900 204 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 190 IPR044628 GO:0004364
Bisa12g1900 204 SUPERFAMILY GST C-terminal domain-like 75 188 IPR036282 -
Bisa12g1900 204 Pfam Glutathione S-transferase, N-terminal domain 8 76 IPR004045 -
Bisa12g1900 204 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Bisa12g1900 204 CDD GST_N_EF1Bgamma 3 77 - -
Bisa12g1900 204 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 204 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1900 Bisa-ChrBisa12 43627720 43631353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1900 1 188 Eukaryotic Initiation Factors Gene Family AT1G09640 73.936 3.38e-99 286