Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1895 ATGTCGACCTCTCCGCCGCATCTCTCAGAGTCACCGCCGGCGAACCGCGCCGACAATGATCTGACTAATGAGATAGCGTTGCCGGCATCCTGCAGAGTCAAGCTCCGGAAAATGCCTCCGATTCCGAATCGGTGGACAACGATAGAGGACGAGGAAGGCGGCCAGAAGGTGGAAGGTAAAGAAGAACAGGAGAAACCCGAAGATGTTTCCTCCTCGATTTTGCAAGCGTCATCTTTAGGGCTTAATCACATACGAACACGCTCGGTTCCTTCGCCTCTTCGGTTTCCGTCTTTGGGTGGCACGTCTTCGAATTTGAGCAGGGATTCTGTCAGGACTGATGAAGGGACTAATGCCAATCCCTTTTCGAACACTCCTCTTCAAAATGTGGCTTCAACGGAACTAGGTCTAGATTATTCTTCTGATCGGAAAAAATTACAGTGGAGTCAATGCAAACCGTCGAATGGTCCTTCACATGTCCTTCCTGTGCCGCAGGGTAATCAAGAAAATCTTGCCAAAGAATTGCAGTCCCCACGCTTTCAGGAAGTAATGCGGGTCACAAGTGGGCGCAAGAAGAAACCCCTCGATTTCAAAAGCTACTCCCATGAGCTTAACTCCAGAGGAGTTAAAGCTTTCCCAGTTAGTAAACGTGCATTTGGGCATATGGAGGAAGTCATGGTGGCAGTCAGAACTAGGTTTGGAAAGCTAAAGGAAGAAGTTGATTCTGACTTAAGTGTTTTTGCTGGAGATTTGGTGGGTATTCTCGAAAAAACTTCAGGGTCTCATCCTGAATGGAGCGAGACTTTGGAGGATCTATTAGTTGTTTCCCGACAATGTGCAATGATGTCGTCTGGTGAGTTTTGGATAAAGTGTGAAGGCATTGTTCAGAATTTAGATGACAGGCGTCAAGAGTTACCAATGGGAATCCTCAAGCAAGCTCATACACGCATACTTTTTATCCTCAGTCGGTGCACTCGTCTTGTGCAATTCCAGAAAGAAAGTGGCTATGAACAAGATCACATACTAGGTCTTCACCAACTCAGCGATCTAGGAGTTTATCCAGAGAAAATTTTGCAGGCTGTACAACAGAATCCAGGTGAAAATGAGATGGATGAGCAGTTGAAAAAATCACAGTGTAAAGAACCAGATAATCTCATAACGAATCAAAATCAAGTTGACCAGCTTGCGAGTACTGCAACTGACATTGGGGAGATTAGCACTGCCAAAAGTGTTGATTCAACTGCAAGCAGCTATAGGATGTCCTCTTGGAAAAAGTTTCCAGTTCCTGCTGAGAAGAAGTGTAAATGTAAAGGTCAGGGTACTTTAGATTTGTCATCCAAGGGCAAACTGGATCAGATTGAAGTCAAAGATGAATATGAAAACCTGGATACTCATTCATGTAATCCTGAAAATTCAGAGTCATCCTCCAGAACCCAGAAAATTTCTTGGGGATTCTGGGGAGATCATCACAATCTAACATATGAGAATTCAATGATCTGCAGAATTTGTGAGGTTGAGATACCAATTGTACATGTGGAGGAGCACTCTCAAATATGCACAATTGCTGATAGATGTGATTTGAAAGGTTTAACTGTAAATGAAAGGCTTGAAAGAGTTGCTGAAATTATTGAAAAGATACTAGAATCATGGACACCGAAAAGCACACCAAAAAGCACTGATGGTCCCGGAGAAGGATTTGAGAATGCGAGATTGTCTACATCAAGTATGCATGAAGAATTCAATGATTTATCTCTTGAGAGAAACAGCTTATCTTGTAGATGCTCAGAAGACATGCTTGACTTTGCTCTTGAAGCTGACAATACTTTTGTTAAGGATGATCTGAACCATTTGCCGAAATTATCATGTGAAACACATTCCTCCTTCAAACCTGATCAAGGCACAAAGGTGTCTTCAGCTGGAAGCTTGACACCAAGATCACCACTGCTAACACCACGAACAAGTCAGCTAGAAATGTTATTAAGTGGGCGAAGAACAATATTGGAACTTGAGAATTATTGCCAGATAAACAAGCTAGTGGAAATTGCTCGTTCAGTTGCAAATGTGAACAATTGTGACTACAGTGCTTTGGAGTATATGCTTGAGCGCTTAGAAGACCTTAAATATGCCATTCAGGACAGAAAGGTGGATGCTCTTGTTGTAGAGACTTTTGGACGACGCATTGAGAAACTTTTGCAGGAGAAATATATATATCTTTGTGGGCATATAGAAGATGAAAAGGTAGACTCGTCGAACAGCATGGTTGAGGAAGAGAGTTCAGTGGAAGACGATACTATCCGTAGCTTCCGTGCTAGCCCCATTAATCATTGTTCTAAGGACCGTACCTCAATTGAAGACTTTGAAATAATAAAACCAATAAGCCGGGGCGCATTTGGACGAGTTTTCCTTGCCCGAAAAAGGGCAACTGGTGATTTATTTGCTATAAAGGTACTAAAAAAGGCTGATATGATCCGTAAAAATGCAGTTGAAAGTATTTTGGCTGAGAGAAACATACTTATATCAGCTCGTAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACTTGTAGGGAAAATCTTTATCTGGTTATGGAGTTTTTAAATGGAGGAGACCTTTATTCTCTATTGAGAAATTTAGGTTGCTTAGATGAGGACATGGCACGAGTATATATAGCAGAAGTTGTGCTTGCATTGGAGTATTTGCATTCCTTACATGTAATTCACAGAGACTTGAAGCCTGATAACTTGTTGATTGGTCAATATGGTCACATTAAGTTGACAGACTTTGGGCTCTCCAAGGTTGGCCTTATTGACAGCACAGATGACTTATCAGCTCCATCATTTTCTACTAATGGTATCCTAGGAGATGAAGAACCAAAAAAACATTCTCCAAAAGTGGAGCAACGTCAAAAGCAACCAGTAGTTGGCACCCCTGATTATTTGGCACCTGAGATACTTCTTGGCATGGGACATGGTACAACTGCAGATTGGTGGTCTGTGGGTGTAATACTTTATGAGCTCCTTGTGGGTATTCCACCATTTAATTCAAAACATCCACAGCAAATCTTTGATAACATAATTAACAGAGACATACAGTGGCCCACAATACCTGAGGAGATGAGCTGTGAAGCATACGATTTGATTGACAAATTACTCGCTGAAAATCCAGTTCAAAGATTAGGAGCAACAGGAGCTGCTGAGGTTAAAATGCACCCTTTCTTCAAGGATATTGATTGGGATAACCTTGCAAGGCAGAAGGCAATGTTCATACCATCAGCTGAAACTCTTGACACTAGTTACTTCATGAGCCGGTATATATGGAACCCAGAAGATGAACATCTCGCTGGATGTAGTGATTTTGATGACCTGACTGATTCTTGCTGCAGTGGTTCAGGCAGTGACTTAGTAGATGAAGACGGGGATGAATGTGGTAGTTTAGCAGACTTTAGTGGACCAAATCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAATTTGTCTCAGTTAGCATCTATCAATTATGATCTTGTGATTAAGAACTCCAAAGAATCAACGGATAACCATAAACCATCTGCCTCTTGA 3582 0.4182 MSTSPPHLSESPPANRADNDLTNEIALPASCRVKLRKMPPIPNRWTTIEDEEGGQKVEGKEEQEKPEDVSSSILQASSLGLNHIRTRSVPSPLRFPSLGGTSSNLSRDSVRTDEGTNANPFSNTPLQNVASTELGLDYSSDRKKLQWSQCKPSNGPSHVLPVPQGNQENLAKELQSPRFQEVMRVTSGRKKKPLDFKSYSHELNSRGVKAFPVSKRAFGHMEEVMVAVRTRFGKLKEEVDSDLSVFAGDLVGILEKTSGSHPEWSETLEDLLVVSRQCAMMSSGEFWIKCEGIVQNLDDRRQELPMGILKQAHTRILFILSRCTRLVQFQKESGYEQDHILGLHQLSDLGVYPEKILQAVQQNPGENEMDEQLKKSQCKEPDNLITNQNQVDQLASTATDIGEISTAKSVDSTASSYRMSSWKKFPVPAEKKCKCKGQGTLDLSSKGKLDQIEVKDEYENLDTHSCNPENSESSSRTQKISWGFWGDHHNLTYENSMICRICEVEIPIVHVEEHSQICTIADRCDLKGLTVNERLERVAEIIEKILESWTPKSTPKSTDGPGEGFENARLSTSSMHEEFNDLSLERNSLSCRCSEDMLDFALEADNTFVKDDLNHLPKLSCETHSSFKPDQGTKVSSAGSLTPRSPLLTPRTSQLEMLLSGRRTILELENYCQINKLVEIARSVANVNNCDYSALEYMLERLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYIYLCGHIEDEKVDSSNSMVEEESSVEDDTIRSFRASPINHCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISARNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLHVIHRDLKPDNLLIGQYGHIKLTDFGLSKVGLIDSTDDLSAPSFSTNGILGDEEPKKHSPKVEQRQKQPVVGTPDYLAPEILLGMGHGTTADWWSVGVILYELLVGIPPFNSKHPQQIFDNIINRDIQWPTIPEEMSCEAYDLIDKLLAENPVQRLGATGAAEVKMHPFFKDIDWDNLARQKAMFIPSAETLDTSYFMSRYIWNPEDEHLAGCSDFDDLTDSCCSGSGSDLVDEDGDECGSLADFSGPNLEVQYSFSNFSFKNLSQLASINYDLVIKNSKESTDNHKPSAS 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 49 68 - -
Bisa12g1895 1193 SMART serkin_6 785 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 145 164 - -
Bisa12g1895 1193 ProSiteProfiles Protein kinase domain profile. 785 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1895 1193 Gene3D Phosphorylase Kinase; domain 1 783 1099 - -
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 949 971 - -
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 1 18 - -
Bisa12g1895 1193 FunFam probable serine/threonine protein kinase IREH1 783 872 - -
Bisa12g1895 1193 Pfam Protein kinase domain 785 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1895 1193 Gene3D Transferase(Phosphotransferase) domain 1 869 1090 - -
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 1 71 - -
Bisa12g1895 1193 FunFam Serine/threonine protein kinase 15 963 1090 - -
Bisa12g1895 1193 CDD STKc_MAST_like 791 1077 - -
Bisa12g1895 1193 ProSiteProfiles AGC-kinase C-terminal domain profile. 1073 1173 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 88 128 - -
Bisa12g1895 1193 FunFam AGC protein kinase 865 936 - -
Bisa12g1895 1193 PANTHER SERINE/THREONINE-PROTEIN KINASE 523 1134 - -
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 624 646 - -
Bisa12g1895 1193 SUPERFAMILY Protein kinase-like (PK-like) 769 1096 IPR011009 -
Bisa12g1895 1193 MobiDBLite consensus disorder prediction 95 128 - -
Bisa12g1895 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 904 916 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1895 Bisa-ChrBisa12 43244113 43292265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1895 35 1192 AGC Kinase Gene Family AT5G62310 62.489 0.0 1404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Bisa12g1895 Pkinase 1.1e-62 CL0016