Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1880 ATGTCTATATTTGTTGCTCTTTTGTTCATCATCTCATCCCTCCACACATCCTTTGCTGCTTCATCCAACTCCACCAATTCCCTCAAAATCTACAAATCATTCGTCAAAAAGTATTGCAACACAACCACGTACCCTAAAGTTTGCTACAAATCTCTCTCCCCATATGCCTCTCTCATCAAAACAGACCCTCTAATTCTCACCAAATCCTCCATCTATATTACTCTCAAATCCATCACCAAGGCTTCTTCTTCCCTCCGAAAGCTCTCCTACACCAAAAGTCTCACCCACAACGAAACCCTAGTTGTTCGGGACTGCCTCGAGAACGTTTATGATTCACTTGATGAAGTCAAGCAATCCGCCGTAGCGATCAAACACTTGAACGACACTTCCACTAACGAAGACAAGTTTCAATGGAGTAACATAAAGACGTGGATGAGTGCCGCCATCACTGACGACGTTACTTGCTTGGACGAGTTCGACGAGATGATGGTTCGCCCTTCTTTGCAGAAGAAGATTAAAACCTACGTCACCAACATTATGAGCCTAATCAGCAACGCCCTCTCTCTCGTCAACAAGTATACCTACTATTGA 591 0.4382 MSIFVALLFIISSLHTSFAASSNSTNSLKIYKSFVKKYCNTTTYPKVCYKSLSPYASLIKTDPLILTKSSIYITLKSITKASSSLRKLSYTKSLTHNETLVVRDCLENVYDSLDEVKQSAVAIKHLNDTSTNEDKFQWSNIKTWMSAAITDDVTCLDEFDEMMVRPSLQKKIKTYVTNIMSLISNALSLVNKYTYY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1880 196 SMART PMEI_2 30 189 IPR006501 GO:0004857
Bisa12g1880 196 CDD PMEI-like_3 39 194 - -
Bisa12g1880 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 193 IPR035513 -
Bisa12g1880 196 NCBIfam pectinesterase inhibitor domain 4 194 IPR006501 GO:0004857
Bisa12g1880 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 193 IPR035513 -
Bisa12g1880 196 Pfam Plant invertase/pectin methylesterase inhibitor 33 189 IPR006501 GO:0004857
Bisa12g1880 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1880 Bisa-ChrBisa12 42128615 42129205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1880 33 194 Carbohydrate Esterase AT1G53830 26.220 1.42e-12 63.5